Gene
| Gene Model ID | aug_v2a.09658 |
|---|---|
| Locus | scaf3696 : 28266 ... 37931 : + |
| To GenomeBrowser | scaf3696:28266..37931 |
| Genes list of scaffold | scaf3696 |
Manual annotation
| Study field | Photoreceptors / Circadian |
|---|---|
| Gene name | Adi-nr1d1-3 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear receptor subfamily 2 group e member 1 | GO:0003707 GO:0004879 GO:0005634 GO:0006355 GO:0008270 GO:0030522 GO:0043401 GO:0043565 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.09658.t1 | gi|156376476|ref|XP_001630386.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.09658.t1 | gi|259013325|ref|NP_001158362.1| | tailless [Saccoglossus kowalevskii] | 0.0 |
| aug_v2a.09658.t1 | gi|676484842|ref|XP_009063473.1| | hypothetical protein LOTGIDRAFT_130367, partial [Lottia gigantea] | 0.0 |
| aug_v2a.09658.t1 | gi|632951059|ref|XP_007891086.1| | PREDICTED: nuclear receptor subfamily 2 group E member 1 [Callorhinchus milii] | 0.0 |
| aug_v2a.09658.t1 | gi|542232614|ref|XP_003449911.2| | PREDICTED: nuclear receptor subfamily 2 group E member 1-like isoform 2 [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | aug_v2a.09658.t1 |
|---|---|
| Definition | - |
>aug_v2a.09658.t1 aagatgcactgttcttctgaaacattgccttcccttagtgcagtacaagaaatctcaagaccaatgtggaagttccgcgt agtaacaaagctttcatctaaaatgaactctgatcagcaactagacgacgtggatgttgataacaacgacaaatcgaaac ctaatggtatttctcgttcactcagtcgaatttgggacttaaacttaagttgcccttaatttttggtcacatgtaactaa tctcgaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccactctctctttctttacatgtacgctgcgaaggccgac ttctggatattccttgcaaagtctgcggagatcgatcttctgggaaacattacggaatttatgcttgtgacggctgcagt ggctttttcaagagaagtattcgcagaaatcgttcttacacttgcagagctaccaatggcaagggcaactgtccggttga taaaatccacagaaaccagtgccgatcctgtcggttgaagaaatgctttgaagtcactatgaacaaagatggtaagggac aaagtttccttgtaataattgctcagggcgttatgtcattttatatgggaaatcatattcaagaccaatgatttctctgg cttggtgaaatcttgatttattggtatctaaattgttctatgccgggtgtcgtctatttagcgattacaccaacacgggg agtttgatatcgaggaaatctttaaaaccaacaactcgttttgatgcttttatttacatttcccttattaacaccccttt aaaacaacttcggaactgtcgcaacgtcgtaacgttaatctaatatttgttaaaagcgtttaaccggaccgtttgtcttt cacccgtcacaggagagaaatcttagttatctaaaaattctggcaagttccgaacgagcaacatcgcatcacttgttgtg atacgatgaggtgataaattttcgtccctcactcagtgtcagcgaaagttaaaaaatgacttcagtggaaataattattt ggctggtatctcttcgtcaaatgaaatttccatatatttttcaaaaatagaataaccgatacaacgaaatcctttagaga gcaaattacaaaacctctgctaaatacatctaaacgcggaacgtttcagtttacaagctcagttagattcattcacatcc acatattgttaattttgtcacagatgattttgtggtaatgattgtttgttcttttatatttgatcaaactagaatgaagc gttttgatgacattataccaaacgacttttccaatactgaacataaagaaaaaatcaccgatttcaggagtaaattttta tctcttttcgcttagttgtcatattgaagaagaagtcatttaaaagtcatttccctgtcgagtttcatgtattacaaact caccgtcatcatacagatttttatttgctcaaaacatttttgcctttttcctctttgataatgatttctatacggttttt tcaatagcttgaagaaatcccgacgcttcgttcgatcgattcatgacttttttctctgattttaaaatccggcttttacc accatgagtaaagccggaaggaccagttgcttaattgaaaagaatttcaaaaaagtgcattttgtcaattatatttattg acaagtacaccctaatctagattcagaagaaaaaatcaaggaaacaatgaagaaatgcctggaatttgagaatcatacat aatcacacatttactgactgtcagttgctttggcacaagtttgctttgtttgaggaattcattttaattcgaagacggta aggtttcccttttactttgacaaatttcttattgaaatctgtttggtctgactcttatgcttgaaaggatgatcaacaag atcttagctgatggaatcattgaatgaaattgaatttttctctcttcacactttttcaaaagcagggcaaagaatatttc ctggagccgccggaaaaacgacgtaatagctaagaacaagttcattaagtagaaaaatcaaaaaatacgttgtaattaaa gcccaaagaccgcaggaaatcactcgcttttcagcttatgaactttttcttcacaaagctcaaacataaaacgaaagctt tttaggcgtattcaataaatttgcttttaagcgatacgagattcacctggctctaaaacgacttcactttaagcctatta taatacgttgatttctgagtgcccgggtacaggcaaaccgtcaagattgtaaaacaaactgttttcttcatgccataaat ttagatcaatggtttttcaaactttcattaattcatttataaaccttactctccggaaaaacgggcggttttcggtaaaa tcgattgcatgagaacacagacaagaggagtttaactttattacgagtttcatgtttttttaattgagaaaaattattga gagttcttacgaccaagcctttcagaaatcattgagcttgagttggtaatacatttagcgtagtaagttctttctgtggt ggaaaagaaatcaaaatcaacaaggggcaaccttccttacattagttaaaattggattcaatcaattatattagaatcat ttaaacgctttttttttagtgacataaaacaactttaactgaatttatacttattggattgaaatttatcgagtgtggca gttggagtcaataaaaaaatctactgccggaacgttttggttggcaaaaaaggtcatgttttctttctgttcaaataacc tctaaaaagtatgctgaaatatgccataacagattaatgcgcaaataatgaattaattctcaattacctattttaggcga tttggaaagaaaaactctatatttttcacggtcttccaccactttttttttctcttaataaccttacttcgagtgtataa ggacgccaaaaaatatattatgctttttcgataaacgttttccgttactttgtaatttctagagatatcgacccctcatg gggctggaggagataaggttctcattttccttgttgaagaacaaaacaaaaatatacgttaatgagaaaatgtaaatctt tggatatggtgaagaaaatagttttattggtctttcgatatatcaagatatatgaagaaaaagaaatcgtttttattgtt tccatgggtgtgtttttttgcgacaattatattcgaaatatcggcgaatggcagttttgttccctagactagtgcatcta tatcagtctacataatcgctgaacactggctaaacgactatacctttatttaatttttaatgtctcgttttgttttatat ctaagtttcattaagtgacccccacggcgcgttttgaaaacgctctcgtcgtcaaaactaaagataattcttaacaagaa accgagaattcgctgtggagattgatattgcagcaaaccaagcgaaatatgaaacaagttccaaagactggaaattgtat tacttggcaaaaatgactcttacataaactgttcaagactctggcttacaaacaagatcaaaaagttaagaggcattgat attaaagagctagaattatacggcatatttcggttggtcgatggagacaagtgcagcaaagcaatgcgacttcgtagatg tccacattcgattagacctattctctagtagaagaaactcttcgtaaaaaagaatactacttttgaggaagacagatttt ttgaaaaaaaatgaaatttagacgtcataactattgaaatgcgattatagagatagtaagtctttaattagattcaccta ttccttacaaactaacgctttattttagagatgtgatcggtgaaaataaaattaaacaaccgagcgaactgtgattagtc atgatcttctgaaacataacttccaaaattgattttaacgtcggttgaccggctaaaaaaataaataagtcgtttctacc tcttcttcttgtgcgcatgggttagaaacaagccgctttttatgcgaaaggagaaatgtacacattaaatatttaatttc ttctttttttgccagcagcgttatctcaaaagtacccgattatggcacataacaagtgcctcgtggttagtgcaacgcaa tgtgggaaaattatagagaaactctcctaactttcgcccaaattgattaagtgtcctgtttaagttccagtacgctggcc tttaaaatgcctaaattcttatttttgctatgtattattcagttcgttttaaatcaaatgtgcttttgagttcggacatg ataaaatttgcttttatattagcctatttctgatggatagtttgtctttgttttcctcgctgcaaaattaaatttcggaa tatttttgtttggacttctcatttaacatcatttaaaaacagttatcttgtggcagaagacctgctgcatcagcaaatat tatttgtcgtgttttggcgaataaaagaactttttttgtccgtcttcgatattaaattacaaagttgaaatggagcttgt ttggagaaaaaacttgaccatttatttctactgagacacttgacaaattttaaaaggctttctttgtgatcagaaatcag tttttatttcagcacggtggcatcagaatgcggcgcttatcacggggaataggtgataattatctgagtaacagttttcg aaaatttagccgcagggagtcatcgaaaatgaatatttaatgttgttttaatatttcactaaacactgaattccactcaa gccgaaattcaaaccatgtcaaatccataacaattgaataaacacctgtgatttctttgaaaagaagcgcttatgtgtta ttttcctaggtaagatatcattctgccaaaagcacttttggctataaaaaagccacaaaaccagacgataaatcgccctc tcagttttctttttccaaagccaaaccggttttcaccaacactatttcttactattgctgttgtattccttgaaagcaca tcatcaatccggatcagtgggcttctcagtgtatggaaaggtctttgcatccctagatattagctttgaaggcgttttaa gattcaccagtgttgcttttaacaaggtccaatgttgcctccctagggtgttaaaattcagctgttatccatattcaaca agcaaagcaaattgcttgaaaatctcgactattgttctgtgctgtcgattatcggctttgatatcgtgatgatttacttc atgatatgaccttgctaattgaccaaaattaatatttcacgataattccaagggcacgtggcaagttcaaaagcatgaca gaaaccatttgataacagccgataattcacactgagtctggctagtgcctatatcgccgatttgtgtatgaataagaatt ggcagattttttctttttaaatttaaattcaaacaaacagcgcgcgcttcaagattcatgcaattgagcaagtgcgagtg acaatgcaatgccaacaggaatgaaagttcactttgaaagttcaagtatcttcgacaagtttcgattaccttcattaacc gtggaaagaacttgcttactgaggccccgtccacacgaagacgattgtaaacgcaaaagacagtaaacgcaaacttttgt aatgcatttaggccttccgtccacacgaagacgatgaaaacactcaccgtaatcgcataaattcnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgttttca catgctttgctttcgcacttgctaagctttgactaaaaactcgtgccacgttctcggtcaatcagagtcaatcagactgt gacaagcaattactcgcacactttttcgtcctgactcgctgatttgatgatgttacagtgattggcaacttgcttccctt tgaatttggttcaacgaaacccaaactcaactcaaacgtgaaccgtgaaataaatataaaatatgttagcattcttgtgt tgaattatctatttcagttgtgtctatttgcaaggggtttttagtattgaaatataatgaagagacgatctcggcaagcg gaagcttagcaagattcagataaaaattgacctcagtcggaattagctaatagcaaatgcgtttatctcatggatttttt ccatagttctcaacaacagtttatcacacaattcgggcgaaaaaaacttctgggtctgaacttgaattacgtaagcttag tatcataaacaagaatagcttgtgttttctttttgaccattttcagctgttcaacatgaacgcggtcctcgaagctccac tctacggaaacaaaagatgctgaaggaagctcaggagaggatggagattgctacaactgcgcatgtccagcaaagtccta gtggattcatcaacacgttgcttgcagccgagacctgcatggagggctgccaacttccagaaaatgatattgacctgggt ttggattttaaaccaatcagattccagtcagacttgtccatatcgatgtattattcccacccagaagctgtatgcgaggc cgctgccaagttattgttcatgtctgttaaatgggcccggaatatcccgtcattcatgagtctacctttcagagatcagg taagtgcagctcaacctcgttcccaggtagagctcagcctcgttcccaaagcccctgctgtgtggaacaaggtcgagtgc agaaatgacaaactttatttaagtgtctatgtctttagttacaagctaatgagggacactaaaataacaagttgaattcg agatacaaacctttataactagtaccgactcgaaaaaattgcaacgtcttcaacaacggcaattgtcagcgggcattgga ttagcacgcagttcacatccttgtctgttcactgtatgcatctttagtgctcctgaaattaactctttagcatgctatca aaagccaactggttactttataccaaatgggtgtctctatcactctcctgggtttaaactaattcttcgcagtcactgat gcataacgcataaggagtacatccctatggaaactttacatcataactgatgctcgacaacatcatcatatcaaggacac ttagcaagttttgaaggaagtcaattttcgtgaccgatacttaaaggataaacctaaatattggtcaatttgatgtctcc gtaattagtttaatttgtttctaacaggttatcctcctggaagagggttggcgcgagctgtttgttcttggagcgagtca gtggtccatgcctttggaaatcgcgccaattttgtcagctgcgggtatgcacgtagatactactccacccgagtcgatcg ttgatgtcatggcgacagtacgcttgctacaagaaacggttaacaagttcaaagcagccaatgttgactcgactgaatac gcatgtctgaaagcgatagttctgttcaagtcaagtgagtattgaaaaaaaaaaagtgttgctacagtgtttcaagggag ctttgaaacatgggaagatccgtgaaggtacagctgtggtctaaatcgatgggtatagtgctattttatttcaaacgatg cgctcttaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnggaagagttcttgcgaacgaggttgaaaggttagtttctaaagaaactgtggcaccacgtgcttcataa tcgtatggacgcacgctgatgacgcaatgaagccactactggaatgcatgtctgtaagcttttaataggagagattagta cttactcttactctagtgcttagaaacctcccgcacgccaaccatgaaccaagtgttaattaatattccttgaaactttc agcgggatatttctaaattacggttttttcattctacagccgcgtgcgggctcaaagaccccgagcaagtggaatctact caggaccaggcccaactcatgctcggagagtatgttcgtgcccagtgcccaacacaactagcacggtttggacgtctttt acttttactacccgctttgcggcgaataagcaccaaggaaattgaggagcttttctttaagaagacaataggagctgttc ccatcgagagacttctaagcgacatgatgaaaaatgattgataagtgtagcaatgaaaataagtgattttgtttgttata gacgaacggccctgattcctctttgagtctgtatattcagaagtttattaaagtattttgttttat |
|
Protein
| Protein ID | aug_v2a.09658.t1 |
|---|---|
| Definition | - |
>aug_v2a.09658.t1 MNSDQQLDDVDVDNNDKSKPNGRLLDIPCKVCGDRSSGKHYGIYACDGCSGFFKRSIRRNRSYTCRATNGKGNCPVDKIH RNQCRSCRLKKCFEVTMNKDAVQHERGPRSSTLRKQKMLKEAQERMEIATTAHVQQSPSGFINTLLAAETCMEGCQLPEN DIDLGLDFKPIRFQSDLSISMYYSHPEAVCEAAAKLLFMSVKWARNIPSFMSLPFRDQVILLEEGWRELFVLGASQWSMP LEIAPILSAAGMHVDTTPPESIVDVMATVRLLQETVNKFKAANVDSTEYACLKAIVLFKSTACGLKDPEQVESTQDQAQL MLGEYVRAQCPTQLARFGRLLLLLPALRRISTKEIEELFFKKTIGAVPIERLLSDMMKND* |
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