Gene
| Gene Model ID | aug_v2a.09325 |
|---|---|
| Locus | scaf3555 : 203976 ... 206222 : - |
| To GenomeBrowser | scaf3555:203976..206222 |
| Genes list of scaffold | scaf3555 |
Manual annotation
| Study field | Autophagy |
|---|---|
| Gene name | ATG8-3 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| microtubule-associated proteins 1a 1b light chain 3a | GO:0000045 GO:0000407 GO:0000421 GO:0000422 GO:0005829 GO:0006995 GO:0008017 GO:0008429 GO:0019898 GO:0044804 GO:0050811 GO:0061025 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.09325.t1 | gi|156368713|ref|XP_001627837.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.09325.t1 | gi|195996339|ref|XP_002108038.1| | hypothetical protein TRIADDRAFT_19802 [Trichoplax adhaerens] | 0.0 |
| aug_v2a.09325.t1 | gi|395505284|ref|XP_003756972.1| | PREDICTED: microtubule-associated proteins 1A/1B light chain 3A [Sarcophilus harrisii] | 0.0 |
| aug_v2a.09325.t1 | gi|196006570|ref|XP_002113151.1| | hypothetical protein TRIADDRAFT_57027 [Trichoplax adhaerens] | 0.0 |
| aug_v2a.09325.t1 | gi|637297374|ref|XP_008108214.1| | PREDICTED: microtubule-associated proteins 1A/1B light chain 3A [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | aug_v2a.09325.t1 |
|---|---|
| Definition | - |
>aug_v2a.09325.t1 atcgattgaaaaacaaaacaaaaatttcagctgtagttctgtttatcttcgtgtgcccttttcaaaggatactttattac gatgaatggacaaacgtgtaaaccttttaagcaaagaaaaagtttttgtaagtatgttgtgcactattttgtcgtcaaaa cgagccaactccgtgtttggttgttatccgttgaatcaagtggagtggcttttatgcatcgttcctgttgctcttgggtt gtcggtttccttgttattttgttagatactaacactgtttgtctcatctttatcatcacacagctgcaaggaagaacgat tcggagtgtattattcgacaatatcccgataaagtaccggtaaggaagtatttaatatagaccttaagaaatgtgtgcaa tgcaaattatgctctttctatgctttccaattgccgcgctttcaacggtttcatcgtaattcgtcccttttgtttattaa aatattctttcttgtcagcttctatcttggttatttctcaattcatggtgcaaggtgctcgtaaagtgaaaattagtttc ataatgaggaaaccatttctttgtggtacatggataattattatgcgataaaactgttatttccttcactgtcaggtgat cgtggaacgactgaaaaccgaaaagcacttacctgtccttgataaaatcaagtatttggttccatcggacctcaccatga gtagcttgtctagtattataaggcaagtaaagattacctggctaaaacttgcaacaatccctatgtaacatcgattattc aaaccgcggctctattaatgttattaacagtcaacacttcagtcatttcgccttttttttggaactgagtgccatttgaa gggaggaagtgaaagggaatgagttagagctgagggataggaagtgaaagactgtataggagagaccctacgagtagctg attagcccactaagcctacttactacctgtaacagtctcagaactgctcgaagttggaaaatggaatctgattatcattt tacaataaaggcaatttaatgatggccttaacacaattgaagcaagacctcaatgtgacattcgcttggaatcaactcac ccacccttggtgatatcagaggtcaatgacaaattactttacagcaaggcctgttgtcttccgaagcatggtgataatga agatgatgacaaagttgatgatcatagggatgtaatcaatggtgcattaacaccagaaattgttatggcaaggacgtcta acaaatgattctctaaattgtataaaatttgtttgtatttaatacttaagaaacatcctgatgcctccaatttaatttac agaaaaagactccaattatctcccactcaggcattcttcctccttgtgaatgaaaagaatctggtaagtatatcaatcac tgttggggaggtttacaaagatgaaaaagatgaggatggatttatctacatggtgtatgcctcacaagagacctttggtt cctctgaaatataaaggattgtgtttgttgatattttgagtgcaactgatatttctccttaacattcttgtcatgtaagg cttctgtgtaaagagagtgggtttctagcatgataaagtcctgaatttcttcataaaaattgaaaatgcacaatgtttaa tttctggacacagcttttaaatgaagtaagggcaaacaataattataatcttgtaatatattttttaactggcatgaaat gtcaggcaaacaatttaaaattttgatgagcagttaacaagaggtaaaaattactattataatctttgcttcatcagata cagttatcagtatttctcacaaattttaatcataagtaattacttttcatgtattttaaatccagatatcttacatgaaa aatctgtattgtaaacatctttacttgattttgaaatttcttgaggagacaaatccgttactacgtggtgacaagtgctg ggcatttccttccagaaaagagttttgtgcccacaaaggcaacattttggtattagtgcatggtattttaaataaaggat taaggttgtccaggcagataccattccattaagaagggatactacacaacattgtaatttacatatgttagcctacaggt agtgcaagctcattgcaaacttgactgaagttcattgtctaagcttttggcaatttgttatggtcacgataaagttgctt tcatatt |
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Protein
| Protein ID | aug_v2a.09325.t1 |
|---|---|
| Definition | - |
>aug_v2a.09325.t1 MNGQTCKPFKQRKSFSARKNDSECIIRQYPDKVPVIVERLKTEKHLPVLDKIKYLVPSDLTMSSLSSIIRKRLQLSPTQA FFLLVNEKNLVSISITVGEVYKDEKDEDGFIYMVYASQETFGSSEI* |
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