Gene
| Gene Model ID | aug_v2a.08501 |
|---|---|
| Locus | scaf3241 : 429 ... 5905 : - |
| To GenomeBrowser | scaf3241:429..5905 |
| Genes list of scaffold | scaf3241 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine mitochondrial-like | GO:0004372 GO:0005739 GO:0006544 GO:0006563 GO:0030170 GO:0035999 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.08501.t1 | gi|156389492|ref|XP_001635025.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.08501.t1 | gi|556946070|ref|XP_005986324.1| | PREDICTED: serine hydroxymethyltransferase, mitochondrial isoform X1 [Latimeria chalumnae] | 0.0 |
| aug_v2a.08501.t1 | gi|198421647|ref|XP_002126094.1| | PREDICTED: serine hydroxymethyltransferase, mitochondrial [Ciona intestinalis] | 0.0 |
| aug_v2a.08501.t1 | gi|734621380|ref|XP_010738588.1| | PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Larimichthys crocea] | 0.0 |
| aug_v2a.08501.t1 | gi|291241690|ref|XP_002740742.1| | PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | aug_v2a.08501.t1 |
|---|---|
| Definition | - |
>aug_v2a.08501.t1 taatcactctgcaaaggaaattcacattttttgtcttcatttaattacttagtgtgcttttttgtgtcttatctcttcaa aatgttgtccattttacgtaaaattggatctcttgaggtaagtatggttaaacctttttttcgaaaaaaatgataaaagc gttggttatttacgcagcttgtttcaagctgaaatttcttgcagcattatgttaaaaaaaatttccattcgtgcatctat gaaacattgaagcaattataaattcagatccatgaagagtagctgcatgcggatttttagaatgtgacacaaatgtaaca aattaatagaagtttttcttattccaagtagggaatcaggcttattccattccttagtttacaaatagaggacggagcca tgtagaaagattaaatttaaatcattgaaaattcatctctcgactgggaaattattgtatcagctttgtattacagctga caactctttgtttttcaatatttatttgcagtgttggtgtaacagtgtttttggcaaagtagcttgttcctcacatgtgc tgaaggcctctctatggacaggccaggaggcgttggaacaagacgacccagaaatgtgtgacttgattaaacaggagaaa gacagacaagtgagaggcctggaactcattgcatcagaggtattatcattgttcatttaaccgaattctcatggagccaa ggttttgtcatcttaagagtatatatgttttgatctgtcactactttgtacccaggccccttgcaatgggaagtcatttt cttgatgtggtgggtgacttgaatagtgcaacagatatcttgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaataacaaatactc tgagggctaccctgggcagaggtaaaatatttcattttattacatattatgtgtggatatcagcgtgataaagccatgac taaaaatgatacccgtgaagtgatatgatatcatttcactgcagtgaaatagtatcatatcacttcacgggtttgaattg tccaatcaagtagattgtaataatttggtaggacaaatcgggttgcaaactttaggaggcaggcaagaagaaattcacca aaatgcttgtttttgctttctgcaattagcttttttgttcttgtgactgacaaattgttaccnnnnnnnnnnnnnnnnnn nnnncctttcagtgattacttaattgtggttcattttatcaagcttgaatgttgnnnnnnnnnnnnnnnnnnnnnnnnnn nnccttgcaggtattatggtggaacacaaattattgataaaattgaacgtcttgtgcagaagagggcattagaagctttc aatttggatcccaaagagtggggtgttaatgttcaaccgtactcaggtaataaaaaccttatagcataaataatcttttc taaagctgtggctttatcctaagggcttcgattgggcttgtgtacttaatccagaattacttatggcttctttctcaagt ataaataaaatttttgctggatatgtcaccacatatttctttatgataaatgggtgttgataattcaatttcattagaga caagcagttatttgtttcaaatttcaggatcaccagcaaattttgcagcttacacggggctcttgaagccacacgacaga atcatgggacttgaccttccacatgggggacagtaagtatttttgtatgtttctcagagagcaatattaaattcaatttg ttgttgcaatagaagtgaatcagttatcctgttaatgcatggacttttgactaagaatattaaatacaggacnnnnnnnn nnnnnnnnnnnnnnnnnnnnnggaaattccaacataagttttcttgtttggttttgttctgcaataattttcaccaactt gaatgtatatgttgcaggttaatttgatttcaggtcaaaatgattttaacctaggttgatttgtaatttctttgtctctt tttatgataatgaataccagagataaagaaataccagatcagcctaggttaaatcattttgacctgaaatcaaattcaac ctgcaacatatataccaacctctaattcttgagaattatgacatgagatccttttgatttcaggctttttactagtttca tatcacactttccctgtacttgttcttgattactttttctttcagtttaactcatggttttatgacagattcaaagagga tttcagcaacatcaatttattttgagtcaatgccttaccgactaaatgtaagcttagtatgtggttttgtgtaccctgtt taaatcacccctttaaatcttaaataaatgctgaatattacctcacaagtccttcaaggatatttcaggatcagttcttt agaggcttacaaaagttgttcttaggatcgaagcttaaatgtgaaaatgaaagctttggtcttgaagatcttttaacagt ttagtgggcttgtttttgtggcaattgaagataacaaagtatatagtaacagggaagactaacattaaattttttggtag ggtcgagatgagggaagaaatcttcccttctatatgccattacttatcatccacttgctcttaactctggcataaggcta aacagcttagggttcagggacgtaaccttctcaacaccacttgttctcttttaaaattctaataattgaatgtgagttaa aaactgaaacaagtaattgaaataaaaggttacaaagcaaacacgatacaaagtttatacgaagtgagacacaggacgga aagaattattacattgtcacaacagtcgaaattacaagattgctaaaatagttgattcaaggaactggatggagtaaatc taatagagctgtgcatagtgtgaccacttttacgaggagtagcaagagagctaaacaaggtagaactaaaggctatatac actggtaaattatgtgtaaagaaaaccaaggccagctaagcgaatactaaagaaacgaaacgtacaaaagacactaataa acaggcaaaagttaacactgaaagactacctgaaaaaagaagacatgagactgcatgaaaacagaaaacaaagacgaaga aatgttacacttagactctactactggtggcatagtgtctccaacatggttgttgtaatggttaaacaacagtgtttatc aaaacatcttgccaaaggaattaatggttcatacataaaaagtacatggttttgtattagaactagatttttttacagtt tgttgaacatagaggtgccattgcctcccaggtaacaatgcaatgctattcactgaaagttgactgttnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggtgttcccttctcttcaaggaggc cctcacaaccatgcaattgcaggtgtaggagtagcactcaaacaggtaactgttaataataatatcactgtgaagtcctg actttttgaggcttctatacgcaattgcttaaattgcgttcattactgcaaagatcatagctaaacttaataatatcacc tttgtcttcttttcaagtccctgctccaattgtcactcacaattgcacctcaagttagtaatacatgcagtcatatattc tgccctctaattttaacacaacctgtgacgttttttttcttttatttaatgtatgcagcaatttcaaccaccccaatgct ttcagaggcctctttgtaagatagatggctcggtaacacatttgtaactgaggaatgtttagcacaaaatttatgcagaa ccataactgctctttaaacatggatttctttctccagacttctttacaagtgtttaagttgcagacataactggggtcat cttgcctttttttgcatttatgacttgcccgtattaaaagtgtatggttaaattattaatccataaaacagtcgtcaaac tcagataatagctatgaaactggatattatgccaaagactgcttcagagaatgtgatttctctttatagtgactcatcct gcttctgtatattccaggcacaaacaccaatgtttaaagaatatcaacagcaggtcctgaagaatgcaaaagctatggca aatgctttattagaggcaggatattctttggtgtcag |
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Protein
| Protein ID | aug_v2a.08501.t1 |
|---|---|
| Definition | - |
>aug_v2a.08501.t1 MLSILRKIGSLECWCNSVFGKVACSSHVLKASLWTGQEALEQDDPEMCDLIKQEKDRQVRGLELIASEGYPGQRYYGGTQ IIDKIERLVQKRALEAFNLDPKEWGVNVQPYSGSPANFAAYTGLLKPHDRIMGLDLPHGGHLTHGFMTDSKRISATSIYF ESMPYRLNVSLV*GPHNHAIAGVGVALKQAQTPMFKEYQQQVLKNAKAMANALLEAGYSLVS |
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