Gene
| Gene Model ID | aug_v2a.07512 |
|---|---|
| Locus | scaf2817 : 13202 ... 19557 : - |
| To GenomeBrowser | scaf2817:13202..19557 |
| Genes list of scaffold | scaf2817 |
Manual annotation
| Study field | Autophagy |
|---|---|
| Gene name | RBCC1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.07512.t1 | gi|383864689|ref|XP_003707810.1| | PREDICTED: RB1-inducible coiled-coil protein 1 isoform X1 [Megachile rotundata] | 4.0e-35 |
| aug_v2a.07512.t1 | gi|350404862|ref|XP_003487244.1| | PREDICTED: RB1-inducible coiled-coil protein 1 isoform X1 [Bombus impatiens] | 7.0e-35 |
| aug_v2a.07512.t1 | gi|571559734|ref|XP_006566438.1| | PREDICTED: RB1-inducible coiled-coil protein 1 isoform X2 [Apis mellifera] | 3.0e-34 |
| aug_v2a.07512.t1 | gi|340721696|ref|XP_003399252.1| | PREDICTED: RB1-inducible coiled-coil protein 1 isoform X1 [Bombus terrestris] | 3.0e-34 |
| aug_v2a.07512.t1 | gi|571559731|ref|XP_006566437.1| | PREDICTED: RB1-inducible coiled-coil protein 1 isoform X1 [Apis mellifera] | 3.0e-34 |
Transcript
| Transcript ID | aug_v2a.07512.t1 |
|---|---|
| Definition | - |
>aug_v2a.07512.t1 atggatcatgtatgttgaaaagaagatatgtgattgtgatgcaacaatcatcatgtatcatgaaaacatcagacgcatca aaagaaggtaactagtctgttgtctcagccagtgccattttcctctctgttgacaagtccagcgacgttttcaataatgg ctagctctctaatggattttatttagaaggtggtcattactggttatgcactgttttagaaaattttgttgccaaatcta tgggtcatttccggtgggcttgttatacaaagtcccgctggcaaggaagatgtcaccaatggctgagagaaggaaaaata tgaatgctgctgttactaggttctttatgttttctttctataatattcatgaatgatgaagttcgtagaaacatgcttgt caaaaactgaaaaccaaacaacagttctgtaattactacacttactgcatgcggaaatgctcgagtgctatataatccct gatagttggtctaagagtgctgtcaagtacttagtacattagcagggattggtaaggaaaaattaagaactggttaaact catcgtcaattgcaggggtgcctggagaaaagccttaagtgacttctgataaagtaccagattctccttccaactttcct tgtattcagttgtgagtgactaggagaatttgacattgcatcaaaagtcacttaaggccttattccacacacccctttga tgagcatgggagctggtgccatcctaggttggtggggggccctgtgcaaataccaggcacagcagggaggttccatggca accctgtgagcaggaagcagccctgcaagtggccaccaaacggcaccatcacactgaaggaacttcagtagagaaactta cctgacccaatacctgccatgaaccacttccaaatagggatgggaagggctgggcgcagaattggcaaaatagcagcaag ccacaaggctaaattgaagaagcaaactgccaagatagtgaacaaagcagtgatctatccaaggtagtgatccacaaaga tcagcgcagcagacaactgcaattctagcgactagggcccagatgcaagcacctgccgaagcaagcccttgtggccaccc cacagatactggagctgatcgctggaggcattggctcgagattaacttagcctaaattacatttagccacatttataaac cctatactaaaaataatttaatgtgggaactctgttctgagcagctggtcattattagtcccccacacaccatatttgag gaggattttgactgttctcttataacaactacaggttgatagacgaaggacttcggaaaggagtttgatgattatgttgc tcttttaggttggaaatcattgaccaagtgaatgatgcaccgcgcgtctatatattagcagtagctgaggtggttaaaag aagacagttttcatccaattttcaaaaggttagaaattctccactcaaattcaataataaaactacacaaatagaacatt acaagaagtaatcaaacaaccaacttgtgactgataatgacatcattgatttggtttaggatatcaaagttgattaaggt caacttaacaataattatttaggagacatgtttgacacgggacagccttttgcaactctcccaatgtcggtggctttggt tgaaaggctgtaaatgttgtcactgactggattaagctttgcactcctaatgattcctccttttgggattacccatcaat taaataagatattgactggtcaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctgaaattcactggagtgcc aaagtgaatttgttaattttgtcagacattgtgatgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaagt gatggttgcttagcaatgtctgaaggaactgctgaaaagtttcaggtagcaacctggtattgcaacttacatgtagctca tcaggagttcttgtcgctcaatggctagagtactgcactggtgttatggaggtgatgggttcaattcctacctgggactc tgaaaatcctttcagtagttccttcacgtattgtcaagcaaccattgcttacataattaacacactggtgccttcaatgc cattctatctttcagattgnnnnnnnnnnnnnnnnnnnnncaatccagtgggcaagtaaattgtgtgagacttcagacca agcaagatcagaggaatgtgcaagaagggaggagtttgagctacagtttggtacagttctagttcaatgcactttgttac tttacactttacttttacccggtagaaatataaactcccttggtgcatatttgttgttttttgtgttcaacagaatgcgt aatacctatgtcatttttcagtcctgccagttttacaatgccctccaggtattgattgcagataccaggtcatactactt gcatcatttttcagccctgtggggtttacaatgttgcgtgggtagtgatcacggataccagatcatttcagtcttgggcc accatcttggacagactgacacacttggctttgatctcatgccggtatcgatctgatgccagacatgataaatttagacc atctcaagttgctttaattattgtaaattacaaaattaccaggttatgaccatgtctgtagtaggtcagccaaaaaaaaa aaaacaggcaaattccagttattaagcaacaaaagacttcaaatgcacttttccaatctctgattattactagttaataa gcaaagatagaggtggttgtgttgtggttgggtcacgagcattcagatcttaaaggaacagtgtcacgccattttagtgg aacttcagaggagtgaaaatgctttataaagtcatttgaaataaaaaataatgctaccattgttatcagcatcaaagtca atcagcgccattgccaattaatcattggtcagaatcgttgcactcgttatcttaataattattgtcattgtcttggatca gaatcgtgattgcactcatcgccattgttgtagtgtctaacaatcaatgctttatctcattaccctcttctaggtcagca cttcctgcagaatctttttagaggcctaactgaccgaccatccaaatacccagagaagcagccaagagtctttgatgagc agctgccagttataactgatggcgaccttcaacagctgcattgtgagatcccggagttggcaacttttcttgaaaacagt tcgaccaacgtcagcatgaaagaggagacaggaagaacaagtttctggcaagataaaaaatttgacgacctcaacacagc acagtttcagatgtttttaggagtaaaaacaagtggaggtgcttttgagaaaaagctgagttcctccgttgaaatgtcca catcccaaaaggccacggaaatgagcatcgatgcttccaagcaaattgaatggacatgccaggaagagaaaacccctgta caagatcatgctcctgttcatgaacccaatataaaggtagcaagtgagattttacgagagattgacgagtgcgtcaagga tagcaatgtaaatgaaagacggaaaagtaacagtgatactagttctgaaaagagttcagctttagaggatagtgacttaa tttttcggtcagcgcatgatgactatgttaccgtctttggtgctgacttcgttgccaatgctgatgatgcgaatgctcaa ccagtaggagaacggcaagaagattgttctgctcttcttgacgatgcaagccagacgcccactctcgttagatcaatgac gcagagtactgatcgtagcagtcaaacagagcaaggctctgagggcagcctgcaactacgtgtgtctggtgtcgaggaac ctcttcggaaaggttcaaagattttgggggaaaagctttttgaggatagcaaacagcaacaagctagaaatgaagtggct aaaaaaatagaacagttagaaaatgaattgagaactgctcaaagtactttagaaaatgaatttttgcaaagagagggact tcaacaagcacatgccaaagtgaaggattgtttgaagaaggagtttgaagtaattcggcagaatctaatggaatgtaaac aagtgacaatagacctcacgtcttgtgttaacagagatgttgtggcaatgatggctagctttcaggaaaaaggggaattt tataggaatgctataactgagagtacttctaatcaaagtagagaggaatatgaaagaaaattggctcaactgggtgctca atttgagaaagagagaactgctttctttgaattgaattcgaaacttgagctagaaaatggaagacttagggatgatttga aacggtatgaaactgacagagaaagaagcgaagctcagtacaaagaggaagtggataatcttagtttggtcataaaggag tataaaactaaaattgaggaacaagaaggcactgcaatgaaaattcaagggaacaaatcgcgttatgaggaagatcaaca gaggcgattcaatgctatcatgatgaaactaaaacaagagaaggaaagtgctctttttcaagctcaggagaaaatcaggg agctgacaaagtgtgtggaagaactagagaaagatgttaaatgcttggagatggagaaggataaattggctagggaatgt cagcaatcacaagatgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnntttctcctccttcaacggatatcattgctgttaatttgtggtatcgcagttgccattgtcatcatta ttgccaaagctctgtaacgaagaagcttcgttgtaggatgttggtttgacttcattttactcactatccttagctttaca agaaaaggatgcaaaaattcaagaggctgacatcttactgcagaacaaagaagcagagttcttggaacagttagacaaag aaaaagcatctacccttacactgctacaacttgagaggcaaatgtgggaagcagagagaaaaaaaaagttattaactgga caggaacgggatagagagtgagtgattaaaagaattattttaagctagtaaatttcattattttttggattccatatcac aagaagcttttctcttttaagctaatttaagtactgcgacattccccttcaaccctagaatagttaattttttaaagcag aatagtaaggttgttgaagagagtttatagtgaattataaggtgaattaatgaattaaaagtatattcagactttttctt gcgatgcccatacattttctccttttaactgggaattgttggtggataaaactgtgcaaaaaaaaacagattgtaaggta tgtgttatgtacatcctaacaacagtagataaaccattgagtaggtatttgcaattaaattttatgtttgattttagttg tgaaactgactcagcacttgaggaagactttcaacagaagattcaggcccttgaggaagtaagaataacgaggcactact tatgttttcttagtgattttttttgttatttgtttgtttgttttttcaatgtatcattggttaagatatgttccaaatga ttccagacatattttattacctaagtaatataattattaaggttgagtggattggaactgctgaccccaaaccctagtag ctataacacctattagtataaatttactcatagtct |
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Protein
| Protein ID | aug_v2a.07512.t1 |
|---|---|
| Definition | - |
>aug_v2a.07512.t1 WIMYVEKKICDCDATIIMYHENIRRIKRRLEIIDQVNDAPRVYILAVAEVVKRRQFSSNFQKWASKLCETSDQARSEECA RREEFELQFGQHFLQNLFRGLTDRPSKYPEKQPRVFDEQLPVITDGDLQQLHCEIPELATFLENSSTNVSMKEETGRTSF WQDKKFDDLNTAQFQMFLGVKTSGGAFEKKLSSSVEMSTSQKATEMSIDASKQIEWTCQEEKTPVQDHAPVHEPNIKVAS EILREIDECVKDSNVNERRKSNSDTSSEKSSALEDSDLIFRSAHDDYVTVFGADFVANADDANAQPVGERQEDCSALLDD ASQTPTLVRSMTQSTDRSSQTEQGSEGSLQLRVSGVEEPLRKGSKILGEKLFEDSKQQQARNEVAKKIEQLENELRTAQS TLENEFLQREGLQQAHAKVKDCLKKEFEVIRQNLMECKQVTIDLTSCVNRDVVAMMASFQEKGEFYRNAITESTSNQSRE EYERKLAQLGAQFEKERTAFFELNSKLELENGRLRDDLKRYETDRERSEAQYKEEVDNLSLVIKEYKTKIEEQEGTAMKI QGNKSRYEEDQQRRFNAIMMKLKQEKESALFQAQEKIRELTKCVEELEKDVKCLEMEKDKLARESLQEKDAKIQEADILL QNKEAEFLEQLDKEKASTLTLLQLERQMWEAERKKKLLTGQERDRDCETDSALEEDFQQKIQALEEVEWIGTADPKP* |
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