Gene
| Gene Model ID | aug_v2a.07489 |
|---|---|
| Locus | scaf2807 : 38027 ... 50805 : - |
| To GenomeBrowser | scaf2807:38027..50805 |
| Genes list of scaffold | scaf2807 |
Manual annotation
| Study field | Photoreceptors / Circadian |
|---|---|
| Gene name | Adi-slmb |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| f-box wd repeat-containing protein 1a | GO:0000209 GO:0004842 GO:0006470 GO:0008013 GO:0016874 GO:0019005 GO:0031648 GO:0042753 GO:0043122 GO:0043161 GO:0045309 GO:0045862 GO:0045892 GO:0045893 GO:0046983 GO:0051726 GO:0061136 GO:0071407 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.07489.t1 | gi|156405527|ref|XP_001640783.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.07489.t1 | gi|207080208|ref|NP_001128840.1| | DKFZP468D129 protein [Pongo abelii] | 0.0 |
| aug_v2a.07489.t1 | gi|514761395|ref|XP_005023245.1| | PREDICTED: F-box/WD repeat-containing protein 1A isoform X2 [Anas platyrhynchos] | 0.0 |
| aug_v2a.07489.t1 | gi|704468669|ref|XP_010086315.1| | PREDICTED: F-box/WD repeat-containing protein 1A, partial [Pterocles gutturalis] | 0.0 |
| aug_v2a.07489.t1 | gi|514761391|ref|XP_005023244.1| | PREDICTED: F-box/WD repeat-containing protein 1A isoform X1 [Anas platyrhynchos] | 0.0 |
Transcript
| Transcript ID | aug_v2a.07489.t1 |
|---|---|
| Definition | - |
>aug_v2a.07489.t1 gtcacgatgaaggttcatttctatcaaacagaaggaaacggcgatttttttacttgtccaaaacacttcggtattctagg acgatggaggacgaaatgatcgattatggattcgaagaggatagtgtaagagcatcatacagtgataatctcttcaaatt tctgtgaaattgtgcgaaaaagataattatttttgagaaattggattgttttttttttttttcgcttgtcttcatcaggt tatggttatcgatggagatgacgatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggagccgaaaacttt acatcgaacaaagtcaggcttgcgttaaacatttcgagaagtggtcagaaacccagcaagttgaattcgtcgaatttctt ctttcaaaaatgtgtcattatcagcacggccacatcaattcctatctgaagcctatgttacaacgagatttcataactgc tcttcccggtaagttcaaaatagcttttttaaaagctttcaccgacaggtatcggtagatactcttctgaagtgcgagta aattgcccctaatgttcgtctctcctagtggaaatgaaaacgaaaagaacgcaagttgatgtacgtgaactcgatatttt cacagatgtggttgcttttattttggttacttgagcttccattgcttttcaatgcttcaagcagccgcatttgttgaaag ctagtacattacgttttccatcgttgttttcggcggaaactatttacctattccttctaaactccaaccccttagatttc ctgacagccaatatcgaagtcccgcaactaacttcttgtttatatagtttgggtaccacgcaacattcaaccgtttgttc aattttgttaggtagtcgagggtttgtttacattcgtactttacatcttaatcagatttttggttaacccaggcttttgg ttccaccttgactatttcaaatgaaactcgccctatcttccgttgtccttataaacatttgggcaatatgtcctaaattt tggcaaactctccggaatggtctgtatatttaatttatgcatgttttttacttcctccaggatgaatcaaactattgcca gcagcttaaaaattcttagtagtgacaaccaaattttacttctaataaaattagcagtagtgtgaaaacaatattgtttt cattgttccaaatgttgtaagaaattatcactggatgtattgctcaagtttttacattgaatggaaatcaatacaatatc aatctcaatgatgaataagtaccctaatagacaaaggaaagactgaatcaaaaaatgttgaattcctcttcacctgaact tcaattaaattttttgatcaacaacatctgcaaggaattatagcgaaatgtcatagctccttactaccagtacatgtttc atttttactgccagtttaatgacaagaaggctcccattgtgacagtttttagggagctgtccctgtgaagagaaattctg acaaagcaccgtagtacactgtttgttatgtaatgtaccagagtatatcttctggtaattgtattttgtatggtaataag tgaatatgatttaaacaagattatgagtcaattcttaacaaatctactttgtgtgggaaagtggttgcaatcaagactgg gtaaaacatgaaatctcgcaatattagtcaaaatctccatttttttctgtcatggatctccagatatttctttatcaagg gctttatcgtggtataatatccatcttgctgatgatgtcattaccagttgccaaaaagaactttgatgttcaccttctgc cattctgaaaatgggaggtggattcctagggtatcaagggtattctaatgcatcagcctgcaagcttggcaatatcccag caatccaacattagtcctcgttccaagtaccctgtcttattggaagggtaaacagagggtgggatgggagaacagttgag tataaaagcaaaacataaactgtgatctattgtacaaaattgtacacaaatgactttccatgaaatggttgttaagcaag gctctctggcacagttgcacttgggttaaaaggtcgtggaagagagaggcactgcactctcaaacaggttctccaaaatc ccacatgagtgggaaaagattgtactgatcataattgtagaaatgttttatatatttgtatatgttgtggtttaaatgta tccttggtttaatgttttttgaactggtttcaattttgtttgccattgttccagattatggtaatgaatatgtgacaaaa gaacataaaaattgaaccggttttaaaatttggcaccaaaaatgaatttaaaccacaacatatatatatatatgaattat tttctgtgagaaactcaatatgagttatatatagatagatgaatcatattctctgtgagaaacttttgtcaaatatttgc cctgtggatactccctttatttctgatttacatttatctgtaatatacaactatcccccgaaggggaggtgaacagtggt ggatatataccgagacgcgaagcgtcaaggtatatatccaccgctcttcacggaccctgagggggatagttgttttagta tttaccaaatcagatggataaaaaatgctgcttcattaatggccacaatttcttctgaaactttcgcaaaacgatgcgcc atttttctctctgttcgcaaaacagtgaatatccaaggatattccaagctacgggagccaatcaaaacatgtgaaaattg ttatccactgatttgagaaatactgattactgatgtactcaataccttaaaaagttcatataaaaatttgtctttctttc cttctttctgtaagccaaaggattggaccacattgcagaaaacatcttgtcttttctggatgcaaagtctctgtgcgcag cagagacagtttgcaaagaatggtacagagtaatttgcgatggtatgttatggaaaaagcttattgagagaagagtgcga acagatccattgtggaggggattgtcagaaaggaagggatggtaagatttaaactgaagttaaggcatgaattccttatg tttgtttaaattttgtatttgttattgaagtgcggtacaacctcgtttttatacagaccttcattattcgaaggtagtca acagcatctcattcaacttgcttacaatattttttattttggtgtacagtattgtaaaaatgcagtaggtcagtattgaa atctatgaagtgttggtcttttccaaaaggccctttcttcttagcaagcatttctaagcttgtagtaacaaaggactgtt tgaagtgggggaaaatgggtgagattagagtaatgtattttctggtgtataagtcgcctttttgagcactccaaacaatc caccttagctacactaaccaaaactaaacagtcactcagtgggtggaaaagtaacactttgttggtgaaacaaaattatc agaatatgagcaaatccatcctattttttgcttttgcaatccagcacaatgaaaggtgattttgcatttttgatagcatt cactaaaaaattaatacctttatgttttagtatagtatgcattttggagtgtgtcatttgatccatatgatttttctgca cagagatcttattgagttcagtatacgtataattgagtgtgtattcctagcaagttgctttcttccatgcagggcacagt atttattcaaggctcaagttcctgatcctccaagcaatgacttttttaggaaactctatccccaaatcaaggaaaaccta gaggtaatatggttatgattttgtttctgtgatcataaaaggattgccatttcttgaagtatttaagagagtatgcacaa atgtataagttaacattaacacgctactccttccaatattcatacagaagtcacgtggtcttcnnnnnnnnnnnnnnnnn nnnngagaagacgcttcttacagtgtcactgtctgtctaaaaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnta tcattctctcttctctttttgtccgaccaagtgggctggatgtcaggtcaaaccttgtccatggcctgacatatgacaga cttatagaaaaaaattattttcaggctttaataacaaagtcaaaacattttacctgtgattcgttttagtaacctacaac atgtataacttatcaaacatcattaactgagccttgtgataaattttttacagcaatttcctggtagaactgcaattgta ccttatagatctagagtaaatgtttgtcatggatgacaaccaaacttgtgttgaagtgcttttgatatgagtagttgctc tcttttacgtgtagctcctaggtcttttacaataactttatagtaatagtttgttcttgttgttctttgataacaggcaa ttgacacaaattggcgatgtggtggccatctccttcaccgcatcttctgtcgcagtgaaaatagcaaaggtgtctactgt ctgcaatatgatgaccataaaatagttagtggtcttagagataacacaattaaggtaaggagtttgtatagattacagca gcatgtttcagttagcttgttagattttggctggccttaactttcctctcaatttgtgtgttttcgtgatctacattcaa tttctggtttagttgggtaccaaatgagttttttaattagattgcgaaggggctgtttcaagcattcaccctttatcagg gtcctttgttgttcactatgatgcaggcttaatgcttgaaatgctagagttacgatcttctcgcagtggttattgtacca tggtcagtttgtttcatataccaaattttaattatgttgtcaaatgattgtgctgtacataactgaattacaaagaaatt ctcacaaaagagaaaatgttcattcctgttaaagtgttgtgccatatggtatttgcacaacacacctgggtgtactgttt tcaagataagctatctcatacccttagaatataatcatgctaaaagaaaggcagtgaaggggatgttttaggtagaatct gtacaagcactagtgcatctttcaaagaaaaacctaattgtccgagaaagcactagtctgaaatgtgatccatcttcttg cccgaacccaacataaaggggtgtgatgggaaaagagacatttcagccatccttgagcggtaacaccatgggaattgaac ccttattggtaaaattccaaactcagtattcttctcaaagtctgagtttgtgccattattccaggaacatagcttaaatt acagtcttttgactttctcttttcatggttcatgcctttcttttcagatatgggacaaaaacactttagaatgtgtcaaa gtattaactggccacactggctcagtgctctgtcttcagtatgatgagaatgttactgtcactggctctagtgattccac tgttaggtacagttacctagccaatgcaggctgtttattattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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agtttcagtgttatccaacaagtttcaacagatagcagggaaaatgtagcccttgggttgcctatgtttgtgataaacca tttacgcagtagctgtgcaaaatttgttctaaatagtaatacaataatatttaacagttattctttgaggacgcgccgga tatgagctgatatatataaccaacgaggccgtaggccgagttggttattatcagctcatatccagcaagtccgagaagaa taactgttttagtaaattttcaagcaattctcttgatttttttgggtgaaacctcctcaaatcatgacattttctttacc gaagacgttgtgaaaaaatttttttacgacctccaaaatttcagcacaagaaattcgccatcagtttttccttatttggt ctaacttaacgataatggctcatatcatgggcttagggaaccaatcagaaagctggaaaatgattatcctgagctaaaaa tttactaatatctcttgttatttttaggtgtggagcacatcaacttgtgaatttgtcagaaccctgaatggacacaagcg tggaattgcttgtctacagtatagggatcgtttggttgttagtggttcttcagataataccataaggtgatgatgtgttc tattcttaataattaatagaacacagccaggataagtttcacaatttcaaccaaagaatttgctcatgtcatcagtgtgc tctataatcttatggacatccacgctgataatgcaatggagacattgaaatgcatgtctaagcttcagtgggcttgaaga tactaagttacggtatggatgcacttgagaggttgcgaagcacttgagaagctaaagtcgcttgtgcttctctcatgttt atcgacctcctgcaggcatcccttatgcaatggaccaaccatgaaccaattagaattattgtaattgtcaagtacgtaac agaatgtacttagtggtacttgtgttgcttgtatcagtaataatttttcattcattgcttgcaccctgttctctgaaaaa tcaaaaataaagaaacaaacaaataatgacagaaaaatgaagccacaaaccggaaagtatgtgtgcaatcttgtcaccat atttctgcactgaagagcattacgttgttaactgcaaacaggaaaaattgtatgactgtgtctgtttaaattcaggaggt tgctggccattcattgatgattctgtttagtttgaaaaaagtccttttaatttagcatagttatttttataacaagtatt agtttttacattatctgctaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnntaaagaaactgtggtgctgcattggtgggagaggtcaaaacagaaatttggttttatca aacgagttgatgaaggttaaattaccactgtgaaaggtttagaaagctgacgtttcgagcagagcagagtttcgtcagag cgaatttcgaatttttctctgacaaagggctaatgctcgaaatgtcagctttctaaacctttcacggtggtaatttaacc tttatcaactcgtttgataaaaccaaatttctgttttaacactcatcaaaccctgctgaacaaattttcactggccttta ttcttttgaaacaatagattttccaaaactgcatgtggcactgtagacccacagtattcatttcttcatttctcatactg gttctataaaaacaacgggaaaacataaatgtaatttcttctatctgcaggaacatcaaggcagagtttttaggctccaa tttgatgacttccagattgtgagcagctcacatgatgacactattcttatatgggatttcctcaattttccccctgagca aaacaacaggagggcaagtgctgcagcaccctaatagccctcttgtcttcagtagatcaaacctaattctagtaaatgtt gtctttttttttctttttttgtaaaaaaaaatctggaactgaaaagtagtgctgtaaatagtgttgtgcagtgtaattac atgtaactcactcaaggagagccaaacacaaaagcttaggatataaaggttctcatgatgacactatacactcccaggtg gtgttaatttgataatctgaaaaggtattgttgtagcagggggattaaaattggatttttgacaagtagtcacaaataca ttgaaagcagaaaaagcagaagtcaaatttatatttatgcttaaagtttctttcaatgttgaaatggtcaaacctgtaaa tggttgtcaattaatttagttttttttgtggtgacaataattgaaaagtatgttttacaaaaaacttacaaagttggaca aaattgatgttgtcataataaacacatttaaataacatcaaaactttatcttgtgcaggctgatttgaagcaatgtgtgt caaagtcgggttatattttgttaattgaagttctttatcatgtataaattattattgaaagggctagcaaagaagatttc taaagctttaaataatgtttgttgtatcaagttaaaccatttaagcaaaatgctgtcaaggctaatgtaacagtgtaaaa acttcatctcattctttagaagagtccagaaattgactatttgaactggtcatggcagttacaattcagatgacttctta caccttgattatacctcaaactgttcttgcattgtaaaataaccggatgctttacttgtcggcgactgtcgttagatcct aattattattattattgacagacctgtggtactactgaactttcagcctagggcaaagtttgtgactgtagtatttggat tgtattcagaatccagttcaatcaaatttgcagacttcggcaccatcttagattgttagtatgtacgacaaatcactatt tccttgcgcctcaactgttgagaacattatctgtttggcaaaattgtttgtcttttgttgtatgttgtctgactcagcaa tttaattcaattcttttttgttctaacttacttcctcttgcttggacatcacnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnngtagcccagcaatttgattggctgaatactgattttgtaacaagtgtatggtgcagttcacattaaaatttgaaaat agttgttacttgcattttttgtggaagtataacaagatgagtgacgtaaatgtacagacgtggtgtattcttcttggaaa ctgtactagtgttctggctgagaccatgccctttgtaaaagtgtttgttttgtacatgatttgcaaggaatggtttgtaa tacagatatcactgaatgtattgttggattaccagtgttattaaaattagaaatgattt |
|
Protein
| Protein ID | aug_v2a.07489.t1 |
|---|---|
| Definition | - |
>aug_v2a.07489.t1 MEDEMIDYGFEEDSVMVIDGDDDXXXXXXXXXXXXXXSRKLYIEQSQACVKHFEKWSETQQVEFVEFLLSKMCHYQHGHI NSYLKPMLQRDFITALPAKGLDHIAENILSFLDAKSLCAAETVCKEWYRVICDGMLWKKLIERRVRTDPLWRGLSERKGW AQYLFKAQVPDPPSNDFFRKLYPQIKENLEAIDTNWRCGGHLLHRIFCRSENSKGVYCLQYDDHKIVSGLRDNTIKIWDK NTLECVKVLTGHTGSVLCLQYDENVTVTGSSDSTVRNIKAEFLGSNLMTSRL* |
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