Gene
| Gene Model ID | aug_v2a.07427 |
|---|---|
| Locus | scaf2784 : 28920 ... 31046 : + |
| To GenomeBrowser | scaf2784:28920..31046 |
| Genes list of scaffold | scaf2784 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| thyrotroph embryonic factor isoform x3 | GO:0003700 GO:0006355 GO:0043565 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.07427.t1 | gi|597775262|ref|XP_007251333.1| | PREDICTED: transcription factor VBP-like isoform X2 [Astyanax mexicanus] | 1.0e-17 |
| aug_v2a.07427.t1 | gi|597775264|ref|XP_007251334.1| | PREDICTED: transcription factor VBP-like isoform X3 [Astyanax mexicanus] | 1.0e-17 |
| aug_v2a.07427.t1 | gi|597775260|ref|XP_007251332.1| | PREDICTED: transcription factor VBP-like isoform X1 [Astyanax mexicanus] | 1.0e-17 |
Transcript
| Transcript ID | aug_v2a.07427.t1 |
|---|---|
| Definition | - |
>aug_v2a.07427.t1 gttacgtgttcacgttgatagtaacgtttgtgaagatcgtgcagcgaatttacttcaaccatgtcgaggcgttcaagtcc ttctgcgccgaaccagagtaagttgtaaattgagttagagtgagttttggccgaaaattgtcgtagactgtgacaagaaa cctacggaaacgagttggttcttaggtgcaacttaaactgaaggtgacttcaacctaagtattttgtatccgtgttttct tacttgttaggcgacggtgaatcaagcgattctggacttgatactatgtcaagctccactgggaatagttttccctctga ctacatggatttagatgaatttttatctgcacaaactcacaatggtccaggaaacgaagctgtaccaaaagcaagtgaat ccactgcaaatcaacgggtggcctgccctacgagagcagttgtgttagctaagacgaactcgaatcaaataaacgaggga acttcggtaactaacgagacagctggcaaagcgaacgatgctattatgctgaaaacgtcttcgttctcattgaaagtgga ttccagtgtcttacaatcgattccgtccaactcgacagcgcagccttcagcaacgaacgcaattattcagtggtgcaggt ctgttggtgtacctcaacagtccgatctaaaggctttggatcagacttcaggtgttgcccctttacgtaggaggcgaagt gcgaaatatatctacaatcctcttccgatttcgaaaaaggccgacagaaagtttgtgtgtcaagccgaaaaggatgaaaa atactgggaaaggaggataaaaaacaatgtcgccgctaagagatcgagagacatgaggcgacagaaagaaatcgagataa gtgagaagtttaaatcgctggaaagagaaaacgaggatttgaaagacgaagtgcagagactaagagtgaaagcggttgaa ctcgaaagaaaactagcaaaccttcaaggtggaaatgtgtgaggaggaaagtgctaagtcatggcactttcgcagtcagt gagagtgatgtgagctatgccaaacgctctcccattcttttcccgtcgcgtaaatgttggaaacattctacttgtaaagc ttcttcaacgcttactttaggtggactggacttcgtcacatggtggaattcccgttctctggagcatcaatattacacaa tcattaaatattctatctttttaatgccactcgaagcttccttttagaaaatcagctcactagaaggacgaagtgtttca atttggtgcaatattatgcagcaataatttatattgtagtatcagcctgaaagctacttaattattagttactcacgttg gttactgaacccgtacacatgacatgctcaaaaatttcgcccacaaaatttccattactactgaagcttgacctgcgaaa tttttcacctctgaaatacgcaaggcaatgcaagacagtcctttgatgatgaagggatctgtcagttctaccaatgtaaa gtggtctactatgttgaaaaattttgcagttttagcttttctacagacatcaaccatgttgcataaccacatgaggtaaa gaggtatcctcaagtgggattaaagcggtcaacttattgctggagatctccactatctgcaagtatctgatatctaaaat ttgttaggaatgtaaatgataattggattgggtctcttaggtcaatgccatgaaaaaacaagcagaaatagtcaagaggt tcctcaaaatctgatgctcacaaagggaattcctctcaacagaagcaacaaaaataacaataatagtttatttgcgtcaa gatgtaaacacaagatccataatgagagaactgcaacttaagtaaggtacagtgtgctttgacaaaagtctggaacaatt cattcattttcaggaatgtgctgcaagttatttcttcgaagcatagagtgtaatgattcgttgtgtaaagttatggaaca attatatatcttttaaccaagaaggtgacagtgctagtgttgcagtattattgcaaaggttatcttatttgtgtcagcta ttaacaaatgaatctatatcaaccctgaataataactgaaaggcttt |
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Protein
| Protein ID | aug_v2a.07427.t1 |
|---|---|
| Definition | - |
>aug_v2a.07427.t1 MSRRSSPSAPNQSDGESSDSGLDTMSSSTGNSFPSDYMDLDEFLSAQTHNGPGNEAVPKASESTANQRVACPTRAVVLAK TNSNQINEGTSVTNETAGKANDAIMLKTSSFSLKVDSSVLQSIPSNSTAQPSATNAIIQWCRSVGVPQQSDLKALDQTSG VAPLRRRRSAKYIYNPLPISKKADRKFVCQAEKDEKYWERRIKNNVAAKRSRDMRRQKEIEISEKFKSLERENEDLKDEV QRLRVKAVELERKLANLQGGNV* |
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