Gene
| Gene Model ID | aug_v2a.05004 |
|---|---|
| Locus | scaf1849 : 75559 ... 77634 : - |
| To GenomeBrowser | scaf1849:75559..77634 |
| Genes list of scaffold | scaf1849 |
Manual annotation
| Study field | Autophagy |
|---|---|
| Gene name | ATG4-2 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cysteine protease atg4d-like | GO:0005737 GO:0006508 GO:0006914 GO:0008234 GO:0015031 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.05004.t1 | gi|156396522|ref|XP_001637442.1| | predicted protein [Nematostella vectensis] | 4.0e-35 |
| aug_v2a.05004.t1 | gi|260823874|ref|XP_002606893.1| | hypothetical protein BRAFLDRAFT_126356 [Branchiostoma floridae] | 1.0e-26 |
| aug_v2a.05004.t1 | gi|449676306|ref|XP_002158689.2| | PREDICTED: cysteine protease ATG4C-like [Hydra vulgaris] | 8.0e-26 |
| aug_v2a.05004.t1 | gi|573887798|ref|XP_006631671.1| | PREDICTED: cysteine protease ATG4D-like [Lepisosteus oculatus] | 2.0e-25 |
| aug_v2a.05004.t1 | gi|585695569|ref|XP_006822046.1| | PREDICTED: cysteine protease ATG4D-like [Saccoglossus kowalevskii] | 6.0e-25 |
Transcript
| Transcript ID | aug_v2a.05004.t1 |
|---|---|
| Definition | - |
>aug_v2a.05004.t1 tttatacagatgaggttgaacgtctttgcactacctgtagaacacataactggaactgttctggcagcaaatggcactct gttattattttagtccctgtgcggcttggaggagaagccctcaatccaatttatgtaccctgtgttaaggtgagaagctg agtcctggatccaaattcttattgaagctctgcagcagagataatttcgtatttaattataattattaagatggcatgat aaaatctttaaagctgaagctagccccctagaacaagatattattagggttctcacttagtagctttgcatgacggccct aacaagagttccaaaagaaacttgattgaaccacgatcaaattacaacaatactgaatgatattattattgttgaagagg ttgaccatgaaactactaaataagaaaatgatttgaacccagtagtaatatacccgattgaaaatgatcatctgggtgac tggagtccttaggactgttgttggtgatggatgtttcaacaacctgctctgaagccatcttccgagtcaagtgactctga aggtggctttggcacagtttgtggaaacaccagtcaacaatagtgcttctcaggactctagtcagccagatcatcatttt caatcaaggcatgaaacttctgtacagatttctaacactttcatttcttgcttcagtctcttcttactttagatcattgt attggtataattggtggtcgaccaaagcattctctttattttgttggttttcaaggtgtgtcaactattttctgcttatt atgttttcttctatatatttgatcttattcttttccaaagcaaactgggctggttatttgggttatcaaatccagcatgg agcaaaatgatggatctgttacttttgcttgttaaacatgtttcttttccctgtgtacatgcttatgccaagcaggtaac caagtgaataaaagatgcttacctggctgaatgtgtcattaataggaaataaggaatctaatacccttcgaatctcaaga accatagtacttttcatcagatactcaatttgcaatgatatgataagctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatggaagaatttcgttcgctctatggtccatgaagtatacctcct acgggtgtattgttcagccaagagttatgttcctttggtaaacctttgcttgtgtaagcggatgttggatcaactccaac tttttgaaattttttaccaggttaattcttaccacactcaaatattcgcaggatcgaatgattttaaaccatgtggttag ttgtgaatacttttatcacatttttgttgaagcgagtagcttgggcttcaaccgacgtaaagtactgagctcaatcgttg tagatgtatcttttgtttggacctgcaaaactgagaaaatgaaattctcccaacatgatttgtaggacgcttttttttgt tgttttgagatcatacatattcctacataggaagagagggaattaatgccttcagttttcaagtgttgccaacttaaggt tttgtcgctgattggctcatttgaatttttgcatctgctttggttggccaaaggcatttacgctagggttatagtcttcg aggctctctcaaacgtcgtatttatggcttctagagcttatacgcgctttttcaaattggtacacgtgtttgccacacgt gtagctcaattcaacaattaaaaggctaagcttattgtaaatagaagattactaatattaaatttgttttatgaat |
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Protein
| Protein ID | aug_v2a.05004.t1 |
|---|---|
| Definition | - |
>aug_v2a.05004.t1 YTDEVERLCTTCRTHNWNCSGSKWHSVIILVPVRLGGEALNPIYVPCVKSLLTLDHCIGIIGGRPKHSLYFVGFQG* |
|