Gene
| Gene Model ID | aug_v2a.04467 |
|---|---|
| Locus | scaf1643 : 93636 ... 111434 : + |
| To GenomeBrowser | scaf1643:93636..111434 |
| Genes list of scaffold | scaf1643 |
Manual annotation
| Study field | Immunity |
|---|---|
| Gene name | Adi-NF-kB |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear factor nf-kappa-b p105 subunit isoform x1 | GO:0003677 GO:0006355 GO:0010604 GO:0044424 GO:0044699 GO:0048519 GO:0048522 GO:0051173 GO:0071310 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.04467.t1 | gi|156359944|ref|XP_001625023.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.04467.t1 | gi|528500757|ref|XP_003200023.2| | PREDICTED: bicaudal D-related protein 1 isoform X3 [Danio rerio] | 0.0 |
| aug_v2a.04467.t1 | gi|528500753|ref|XP_005170313.1| | PREDICTED: bicaudal D-related protein 1 isoform X1 [Danio rerio] | 0.0 |
| aug_v2a.04467.t1 | gi|528500755|ref|XP_005170314.1| | PREDICTED: bicaudal D-related protein 1 isoform X2 [Danio rerio] | 0.0 |
| aug_v2a.04467.t1 | gi|259013460|ref|NP_001158473.1| | nuclear factor kappa-B [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | aug_v2a.04467.t1 |
|---|---|
| Definition | - |
>aug_v2a.04467.t1 atgtgcacgcgtttcgttttcttgtacaacagaaaataagagtaagagagtaaagttgaattatcgtggtaaaaattggt gaaggttctcttaggaggtaagcagattgcaatataattgtctttcaagttttcacgttggcgtggaatacgccaagcaa gaatccgttcgaaggtgacttcaaatagtcaaagatggttaatgtatgcctcgaacgttacgctgactggcctaaagctt tcccttacaacgagaggtttggtttagcttacaatggcttactataggcatgttcaataattcttttttgtttgacgaga tccgcttggggaatactttccaaaacccggtagacatctcatgtacatacagacaaagaatgtgagagagggtagggtac cctcttatttctaattcctgtctatctgtgttactctttctttaatttaaccctctactcaggaactgaaacttttatta ttatccattggtggaaatgccttgttccctttctacatttaagtttaaaagctcaatattgttataaatgtttccttgga aaattatatttcctttaatcaggaggatgtcagtatgtgaacatctgtgacaaaaaagtcaaattcgggttttggaagga aatagttatgttaatgtttactctctgctcgtataacactgttgttagtaatggtagagtggtttttcagggaatgtaaa aaaccaaagcaattacaaaccctgtaacaaatgcaagctaactaccattttcagctgaccatgaactaatggaattcatg gagtaatttacttgttttcacaaaccaagtggaacataagtaataccagtcatgtagttacctaggaaacaagatggcgt gacacaaatcaaaaccaataccacgcttggtttcactactcaatttgatttgctggtcaaaccaactccaataccttgct tgtttctaataattattggtagggtgatctctctttcattttaccatttttagagccaatttcgacggtcatttgaaaac cactttattagtactgagttaatgaaactagcctgtaggtaattataccagtgattataaaaatctgtcaactgcagaat agaagtctcacttgataatcaagcttatgatttaaaattatgtaatatatcacacacaaggaagagtgtttcatcagata cccaaacacagagaagtgggttgaaaaaaacgaggcataattgttttaaccaacttcaaagtgtttagttatcagatgaa acactctttggagtgtttgacatagtttctcaaagcattgataattcctagagaaagcaaaagttcaccaaatattatta tcaataagaccacatatccaaacctctttcacggtagtgatttccttggttttctcttcatgaaggattaatgaatttga gaatggttgataggaagtcctatctttgaacattatacttcacttaaatggctgcttaatttgtgattggttaattcatc tgtctgagtacagactgtaatcacaaataattgtcaaattacaagacgagggacatttgtttaaaccaatcacatttaag gaatcagaaaactttattctagccttgagcttaaatagtggagccaagcacaagtcctctcctggtcctggagagacgan nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttgtcttttaagaagaggagagaattggagtgcctagggt aaaacctctctcagcagaatggagaaccaattaattcagtcttcatgacgtcaagtcttggaattgaacccgtgatgcat tgatggaagggaaccagtgttaccaccacactgaagaagaagataatttttattgacagcttgtcaaattggctagtggc 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gtacatgatcagtatattaattactattgtttttgctaattttagggatattttgttcatagctagtggccctgaaatat ttttactgtcatacggtaagctcgggttatatgctcaggaatatgttttgtcaaacccatttgtccttcttattgcatga ttaataaagtttcattttgagaattatgactaaaatgcatttagatatattttttaattttattgttatttcccaggtat ttatgtaaacaatgatttgcatctgagtttaacatgaataccacaagtctgtcattgtgnnnnnnnnnnnnnnnnnnnnn nnnnggtatcaactattaatattttgaattttgaaatgtgaactttctgtataaattttatgcctaatacaaagaagaca gcaggttgcattgacttgagattaactgaacctactataaattacatttagccacaaaaaatgaattatattatgctatt tcccacccgagggcctcatcttatcttattgaacttcactgatccagaattgtgttcttcttccagtttcccaaatcttg gtattcaacatgttacaaagaaaaatgtgggctatgtgttgatggacagatacctcaaaatgcagatgttacacacagcc actttgaatgcgctgacgactgatcctagagtctttgatatcggggcaatggtagatgaagcaacagctgatggcgaccg aggagaatttgacaaacagattgcagacacaattgctggtataaattttgtagtgtttccaaagttttggaccccttttg cattaatcttgtcagaacttggtccaaaataatggtaatgaatcttcttgtttagaaaattaataagcagagcctatcct agttttgacaacagaaacagtttattttacagtgcaatgttgattatcctgatctctttacccagtcctgtgtttgattt 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ctgaggtatcaatactcccctattggcttggacaagtcaacattacaataattgctgtcttcgaaaaagttttctgaaag ttataatgtattggattgtccaatgcaggcaactttttgacttgaaggcctatttttcaaccaagggtgggcagcttgct ctttaatgttgttattgaaagtgacagaagcatcatagatgttggcaaaaactctctctatacaaaactgtgctgtattc aaaccttaatttctcttcaactagctgttgtggtttataacatagctagcattttcatgtgatcaaagtcagtcagcaca tgcataatgcatgcataatcagcatcataatcagcacttgcataatgcatgcacaatcttgttaagcatgctgaggttta cctataagaaaaatgctcccaagaaatcaaaatctttgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggaaactgtc acatggtggaaacagtgtaaaacttttaagtacactgaaaattatttgttttgtttttttttnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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agtaattatatcaagttttttctcctaaagagaagctttgtatggttgttattttttatttctttcattttatttttttg ttttcattccagacccccttacaccttgctgtcattacaaaacaaccacgtgctctggactgtctcataaaggccggtgc gaatcccaggttacgtgatcgccacggcaacaccgctgttcacattgcttgcagctatggtgatgccacctgtcttaaag ctctgttgcattacgatgtttcaaaaatggtgctgaactggcagaactaccaaggtaagcgatgttggagttaaattacg cgttgttaggatcccttaacaaaacatgcacaactcccatgctgagcccatgtcacagctttgctttttttcacagagcg aactatttttgagaccgtttctagttcgcaggatcagcgcagtggtgaaagcactccgctttccaatgtgatctgtgttt gactccttgacacgatgacatacgtgtgggttgagtttcttggtcctgtactcagctccgagagcttcttctttggctgt ttcggctttcctatctcattggaattaaaacctaaccctaatcttaaatacacgacattccatttgattagatgtgatgt tatgaaattattgtgttcaacatagagaacgctttctgttttcgtggttttcctaggtttcacacatgggctttttcatg accgttatcttcgacgctatttgatttcaacgtttcgatggactggctggcatctcgcctccagttcatgcggaagatcc gtagccatagtaaccactccggctgcgcgatcgaccgaagtattccgcgtgcagttctctctattggtggagggagtttt tgtccacgtgttcagagtttttgtacacgtgttcagaccatctttaaccaacatggctgattgactgatacttaatagtt atgaaaatatcagagagctgtgtagtggtatgtgttttttaaagagccgaagctgccatttcgatcgaacgcacttcact gatctgtgattgtttgatcaggtctagcagtcattattttttgagtctccactactaccaggttaaattctaatgatgtt ctttgacaagatgggaagacccgagtaggggaccaacagtctcaagctaaatgggggcaaaatgggggcaaatggacgtg gctagctctttcctcactgcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaaacacttgaattcaaaaaggacgttgcgaacatttg aaggataatcgaaccgaagaccaattcgcttacaacgtgtgattgctctattaggtccaggaaattttggatgaagatga agcaccgagtgctgaccccgttgaaggtaggcgccgtgtaaatgaagacctattaaacaatgaaaacccttctctagaca aactcgtttggttactaaatgctgtgcttcagctccccccccccgccccccataacagacttgcctaccctaatcataaa caaaggcacatatacacgaaattacgtgcaaaacataggcattgtttgacagcctcaagttggatgaaaattggttttct tatggaggaagtgtttcatttcgtgtcatgaatgcaactcaaggatcaagagtagctttgaacaactctccaaagttctc gttacctttcataacttgaaagaggcaggcttggtatggagttgctgttcgttaactagttttcctatgtttttgttcac agagttagaaactggtgtcattagtatcaggcttggtaaaggtaagcattcaacagaattttccttgtagagaaatccta tcccgatatcgatacccgggacaaatccagcgggtggtcagagggagacttgaacccaggattattggagttcagatccc cagctcttaccactcggccacgcaaacgtgctgtgtttgaagtcatggttatcgacttttgttcaatgcaggtgatctgg accaacttgatccatacgttcgaagaagaatggcgcagaggctagatcccagtactggagcagactggcgtgatttagcc aggagactggggctagggacacttgccaacgccttcgctatccagtccagtccgaccgtccaggtgttggctcattttga ggtacttgaccaaaattttctttgaatgtttataaaggacttagtaggaactgaactatcttcatctttatcgcaattta tttggatggtgttccagaccgttgccatggtgtcaacatacgtttctgttgtttcgagtcgtacctcgttcccaggagct tttatttccttgtgcctgaggatgcagtggacagatgaaagaccttgggcaccaagatatcnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnntcatcgtagaaaaacgaataactgatggcaattagagacaactgtgacgtaagaggcgagcgtc tttttcgtgtcttctccctcggttacttgccatgcccgtttgtaaacttctgccctgtgcagcgcaggttcgttgcgctc tgaactcggaaatttgttgcgtgactggcttaaaggttgctaaggtaacattctcgttaacacgcattttgatgcctaag aggattgtggctttcggtgtaattatgaaaaaagttgggtaactctattcacttaaggatggtttcttatccaccgaaca aagctagccttatttttagtggctgaggtcggcattcatttcttgtttagagactacattgattcaatgtgtcgctaatg taaagtgttcatatgaatctaggtgctttatttgtttagataaggtaatcgcatgattataggtgttattttatttccaa tctttggtgaatcttattgttgaaaatacaatataaaatgtaattaaacctgaacaaccctggctaaactgaatctatct tcatgtgcttgatctgaacagtaaaaatgttatggatat |
|
Protein
| Protein ID | aug_v2a.04467.t1 |
|---|---|
| Definition | - |
>aug_v2a.04467.t1 MATNSEQQVNATLTDSLLMDVLNPGYLPDISALQVPTGSYQGPYLEILEQPKQRGFRFRYPCEGPSHGGLPGEYSEKGKK SYPSVQLCNYKGPARIVVSLVTSDENPMPHAHSLIGKNASNGVVTVQIGPEQGMTASFPNLGIQHVTKKNVGYVLMDRYL KMQMLHTATLNALTTDPRVFDIGAMVDEATADGDRGEFDKQIADTIAEEEASKVRSLVEKQKNSMNLSVVRLCFQAYLPD DNGCFTKALPPCFSRSVYDSKAPSAANLKICRMDRNSGCVTGNDEVYLLCDKVQKDYSTLQLCLFFNCQLACLTAMGGDT VAIVFKTPAYWNIAVERPVKVHLELRRKSDEETSDPVEFTYQPQMFDKEQIGSKRRKKIPHFSDYFKDGSGAKPRHISVL LSRNAYCRQLAEASRSRQCFRTPLHLAVITKQPRALDCLIKAGANPRLRDRHGNTAVHIACSYGDATCLKALLHYDVSKM VLNWQNYQGFTHGLFHDRYLRRYLISTFRWTGWHLASSSCGRSVAIVQEILDEDEAPSADPVEELETGVISIRLGKGDLD QLDPYVRRRMAQRLDPSTGADWRDLARRLGLGTLANAFAIQSSPTVQVLAHFEKNE* |
|