Gene
| Gene Model ID | aug_v2a.04466 |
|---|---|
| Locus | scaf1643 : 80276 ... 88627 : + |
| To GenomeBrowser | scaf1643:80276..88627 |
| Genes list of scaffold | scaf1643 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pdz domain containing guanine nucleotide exchange pdz- | GO:0050794 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.04466.t1 | gi|242024523|ref|XP_002432677.1| | pdz domain containing guanine nucleotide exchange factor, pdz-gef, putative [Pediculus humanus corporis] | 0.0 |
| aug_v2a.04466.t1 | gi|241813079|ref|XP_002414620.1| | pdz domain-containing guanine nucleotide exchange factor, pdz-gef, putative [Ixodes scapularis] | 0.0 |
| aug_v2a.04466.t1 | gi|642918353|ref|XP_008199964.1| | PREDICTED: LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 2 [Tribolium castaneum] | 0.0 |
| aug_v2a.04466.t1 | gi|449668249|ref|XP_002155415.2| | 0.0 |
Transcript
| Transcript ID | aug_v2a.04466.t1 |
|---|---|
| Definition | - |
>aug_v2a.04466.t1 ttagcgagtttaagcttaatgataacggttcttgtttttgtcctttgcagtaactattcactgtgtgagatcactgtaga agaacagggactcatcagacaacgcaggctccaggacacgctaaacaatttgtcggataaaattcacctaaatggaaggt cagtaaatcatgtgcttggcaattaaaaacgcacgtacgcacacggactagtacaagaaacaaacagaaaatccaggaaa caagtaaaatcgttttaaagagatttagctgcctcgcgagtgaggatagaggctttgaaattattaagtaacctatcgtt ctcttagcgtcttaagaaagctgataatgtgtttgtttcaaactctataggtactacctcaaaaataatcttgtgtcagg ctccttgcttccagacgaggcagctcaggtcagtgggttcgccgtattttatccggcgtttcattttaagattgttggaa acttgtatggcatcagcgagcagtttttctcgtgacttgaatcagtatctcctctcgacctgtcgctgaagatcgcgttt cattatgctggaacaaacccgagaaacgttgggcttaagtttttacgaaaaagttcattcttttcgttattggcgtcact gtttgctgccataatacgagttatgcgagtgactaaaaactcggagtttacagtgaaaattgtttaaatctagactagcc aatcgaaacatgaacaaccaagcgcaagaaccaatccaaacgaagagaacatttggcggtctgcggttgaggcgggaaaa acggctgagtgcaagtcacgtgtggtcgtgattttaaccgtgattggagcgaaatcgtttacctattgggattcgtagtc atagcagctctaaaaaattagcaaagctcggagaaatttcgattcttctcaatctctaagcccttggaaaaatataaata gaatattccaagcacacagcagttataaggtaattcctttgagtaatgcagagtgcgaacttttgattttgtttcatgta ggagctgtccaaggaatcgatctctagtttgttgcaactcaaacctcgtgatttagccaaggaaataacgctgcaggcaa gtttatatattttcctgagtgatctcgaagttaggtgcactgcgtaactgtagtgttttcatttttaggccaaacgacac atggctaaactgatggaagagttttatattagtttgcggacttgttagtactctaagaattcgttattgaaactcgcact taccctccacccctatttttgtccattttgtgtttttcctttccaaactttttgacctcggtaaatttgaaggtgaatac agagggcagagatttcaagcatcgaccttggttgttttcctcgtcggctttactgaattagagaactcctgggagcaaac ttgactcttttctgtgcctcagtgtttcatgcagttgctatctttagagcacttactttcaacacaaagtttcgcgagtt ttcttattcaaaacgtcagttatcaattacttttcatctttcaggatttcgaggtcttcaggagtattgatcctcgagag tatatctacaagttatggaactttggtccaaaactaacggaaaacttacgaaaattttccgaggtaacgacctttgcctt ttagtttcaaagtaatttcaccaattcaatctcgtattcgttctcgtcctctgctggaatgatctaaaggtccccaataa caacttgaactttacaacggacgcatgctacccacagttttcaaccatttcagcgggttaaaataggttgatcaaaatag gttgatcagtcaaacctacgaacttgctttccccactagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcataata attaacatagcacggaaacacggacgcttactgttctttcttttcagcggtctcggtcattcagcggtgcaacggctgaa gaacacgtgggacaaattacccacaagacacagtaaagcatttgaggtaaacttgttgtcccttttccttattccctagc tgactattgacgttatcttgtctcgtcgtttctacaaacaatgatttcacttttctgttctgcttgacaggatcttcaag gtctcatggatccctcaagaaacatgtccaagtatagaaatttgctgaacggagaacacggtgaaccccccctggtgagt taagatgcgcttgcgcaacgaaccagcgtcgtgtgattggctagttgcgccgcgcactgtgcgcgtgcgcgtattcgaca gtcaaagcaaagacgctcggtttcttcttggtccaacagttcttgtttcctttgtgtagcaccactttttttcttccttg ctttagaagacgcttattataacaaaatgctcataatctcgttctagattccgttctttcctgtcatcaccaaggacttg acttttatccatttgggaaacgatagcatcatcgatggtctggtaagctgagcctgttgtttgtgggcaatagatgggcg atagataagttccatgatcacctgagtctcattttcaaagcaagacaaagggtcgcctcgtttctagggtgccctctcct gaccttggaatcgaagggaaggtggtcactctgtaaccccgaagtttggccaagccaagtccctgctttgaataataact cagctgcacttgtttggttgttttaggtaaacttcgaaaagcttcgcctcatcgccagagaaattcgtcagatttccaag ttcaactctattccctacgtaagtggtgcatttgaaaattggaactgagcgctttttttcccactcccatgaaaaccgaa atcacctaattttcgcttttgtttccaggacccagaaactatgttcgaagaggacactaacaaccaaggtggtcctgggc agcagaaggtgacgtcaactgtggttggcatggtgactggtagctccaaccgtcggtccttgcgagaccagaatccaaag aagatgtacgaggaggtatggagcctgagaaagaaattcattgttctagatagttagtgtataccttttcagttccgaaa ctaacccgagtattttctttatcacgcagtccatgatgtcacgcagagtcaagcagtacctctcgggcctgacagtaata caggacgaagagaaattacgtgaaatgtcacacgcttgcgagcccccacaggggtcaggctcctcaggtttgttcatcat ctctcgaaaaattgttgaaacaattagcatttggtggctgaggttaattttttcccgattgatgacaccagatatgactg aagttgttcggtgaaattagcgccaaacccgtcggaaaaaccaccaatctaaacgttttaagacgcccccacggaactaa tcttgttccgtcttctgttgctcgctatttttttagttttcttcattccactgatattttttcttatatatcgtatgatt ttaaatttattttacttcattctttttagctcccccaagcgtacaaacacgcaagaaaaattcgccctcgtcttctcccg tcgcgagcaaaaatgatcgcaaaggaaacaaaccctcagaattaacaggtgagaaagttttctccttaaaagagactgtc gactttttcacgtcgctttaaaacctgaaaagaggcgagtgagatcagtctgtttcgaagagaagtaaacgttttaactt ttgtctactgctatttactctttcagttccttcaccattagcacttaagaaagatttgactggaggtagggaagatgttt cttgcagtagcacgttttattaacacgcgaacatttagaaacaagctgaggaacggttgaaaatgacatcggcgaagtgg gccctaatccaccaaccacacagggaaattatcttgcatgctgttgctcattatgcagatcttggcacacagtagacttt gatttacttagtagaccacgtttttttagtaattggcagaaatgcgtgggaaaggaaagcgattgcgggtttgcaattga tccctattggccaaaggaaacttgctgtgcgttgattggtcatctaacgttgcgcccgcgtcccgttacttaatcacaaa tgaggcttacgtgtgtttcggagctttttgttaaggatatttctttttccttttctcatgtttaggtgatcgcatgtcaa tctcttctactgcaagttcatcttccttagcggaaccggacgtacagtcacctaaactgctcccagaaggtaaacacaaa caaattatcacatgaaggtgaaagtgagggcacgtgaaccggtgccggcaatgcttgttccttaaagtgcaggacatcgc tccaacctcgttcccagtgtccacacaccttttcaatcttgaaaacgaggtggatgacgtttgcgaatatttcgatttct attggctgtcaagtaagtcaccgacttcacgagcattcgaacttcttcgcaagtccatgcagcttcacagtgagattcaa ccgacatgctttgtttaaacgccacgagggggggttatattgtgtctcctgaatccaattaacttcattcacaactgttg ggtcagggtccttcactcagttgttccgtggctggatagtgctgtctcataacctgtcgagttatccggtaattagtagt atccaccctttgaactggggcctggttatgattagcgccagtgagactctttgtgacgtctacagggagaggcagggtct cattaagtggttgtatatgacaaccctctcgaaaccaaaatggcgagttcgttcaaactgatttctttaagttctcatca ccgattttctctttcagatgaagttcatgttttccccgaaaacgaccgaatgtcgcttccagaggacacggtacacatgc aagaattaaaaagattacatttgaacgaggatcatcggcgaccgcattatagatatccacaacgtaagaaaacaccgaca ttcaatttttccaactaagtttggttttctcttggggcgcaagcctgaacccaaactaacataagcacatgtatctagta tcctatcgtggagcacaaaaacatcttactgcgcctgcgcacattactgtgcttgcgtcaccattgtaaaccatgatgaa aacgggagagcgcacggaatactctggaagtctggattctattgttatggctgttattgcaattgagctcgcaatcgagg gtccttttgtttcaaactgcatacagatgagtctaatgggtcagtacagtacagaatgactcattagcctcgtttatgtg ctgaaaccgctgacaaatttaagaagagccatttgaccatatttgggtgtttgaagagtgcgcgccgtcttcaattgacg ttccctttctcttgctaaatttgcctattgattctggtttgacgcttctgtgtggcgttggataatggacaaccccttgt ttttcgattcttctgaccccagttcagaatccagtgtgaatgtggctctatcgcgtccgtcgttcaagcgaaacttcgtg atcttgtatcaggtgtgaaagaaatttaacgagctttctctttttgattttgtttattgtagcattggatggattcagac cgatgagttattcgggtatgttcgcttcctgtttgtgtagtatgtgaccatatagccagttggtgtggacgagagcttga tttcgcgaaacccactgtacagagttaacgctaccatccgtgggttttatagtttctttctctcagccgctttaagatcg cagtataatcctctctccccttccttagggtaaacaacaacagtgaaaataaaatgaaaaatgaagaagttgattcccct gaaatctggcagcgttgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncatccgcgcccattagcaggagcgaat aacagcgctctgaaaatgatatcatagggttgttaaatggttagtcttaaagctgtaatcagaccacgaagcagattgtg ttcttcaaggttacaaacgataacattacacaactccatatcggagaatgacaattagacaatgatttgtttaattcgtt cttatcattctagataagaggtttattattttgaaagggaattctgctgttcggtgcatgtagcttgggaattgaattaa gagtatttaaaccttattagtgtaggtaggatcaaaactagtcatcgaaaataaagcatacatattattttagctcgaaa atttaagtcggagatgtacttatacctatgagttggctaaaccttttgtactcactgtaaatatatcgaaaactaagtta caggtacagattattaaaagaccttttgtaag |
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Protein
| Protein ID | aug_v2a.04466.t1 |
|---|---|
| Definition | - |
>aug_v2a.04466.t1 MITVLVFVLCSNYSLCEITVEEQGLIRQRRLQDTLNNLSDKIHLNGRYYLKNNLVSGSLLPDEAAQELSKESISSLLQLK PRDLAKEITLQDFEVFRSIDPREYIYNGLGHSAVQRLKNTWDKLPTRHSKAFEDLQGLMDPSRNMSKYRNLLNGEHGEPP LIPFFPVITKDLTFIHLGNDSIIDGLVNFEKLRLIAREIRQISKFNSIPYDPETMFEEDTNNQGGPGQQKVTSTVVGMVT GSSNRRSLRDQNPKKMYEESMMSRRVKQYLSGLTVIQDEEKLREMSHACEPPQGSGSSAPPSVQTRKKNSPSSSPVASKN DRKGNKPSELTVPSPLALKKDLTGGDRMSISSTASSSSLAEPDVQSPKLLPEDEVHVFPENDRMSLPEDTVHMQELKRLH LNEDHRRPHYRYPQPLDGFRPMSYSAGANNSALKMIS* |
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