Gene
| Gene Model ID | aug_v2a.04233 |
|---|---|
| Locus | scaf1544 : 68896 ... 75753 : + |
| To GenomeBrowser | scaf1544:68896..75753 |
| Genes list of scaffold | scaf1544 |
Manual annotation
| Study field | Photoreceptors / Circadian |
|---|---|
| Gene name | Adi-nr1d1-6 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 2 nuclear receptor | GO:0003677 GO:0004879 GO:0006351 GO:0030522 GO:0038023 GO:0046872 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.04233.t1 | gi|156380981|ref|XP_001632045.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.04233.t1 | gi|268053961|gb|ACY92467.1| | AmNR2 nuclear receptor [Saccoglossus kowalevskii] | 0.0 |
| aug_v2a.04233.t1 | gi|291234849|ref|XP_002737359.1| | PREDICTED: nuclear receptor subfamily 1 group D member 2 [Saccoglossus kowalevskii] | 0.0 |
| aug_v2a.04233.t1 | gi|524887228|ref|XP_005100202.1| | PREDICTED: steroid hormone receptor ERR2-like [Aplysia californica] | 0.0 |
| aug_v2a.04233.t1 | gi|72013357|ref|XP_784447.1| | 0.0 |
Transcript
| Transcript ID | aug_v2a.04233.t1 |
|---|---|
| Definition | - |
>aug_v2a.04233.t1 atgcttcgccagctgtcaaacaaacctcctacgtttcctctccacgtagaatgaaattaatattttacgggtaaggaaaa tagcatgttagagttcacatagttggcatttatcagcagactgacttcggtgagattactttggtgtgttttcttttggt tttctttcctcggtcttcaatgattaatgacgatgaaaaagtctctgatgctggttttgttcgattgttttgtattcaag gctgtgtcggaaaacgttaagtatttctgttaagatggaagctgatatgcaaaactgtaaactgaagtctaatgcttgac gtgttttataatacctcaaattggctattaatcaaatacacaatatgctttaggcggataaagctgtggctgaagaagta aactcgtttgttggtttcttcgaaaaaggagatcaacggaaggtttcaaacatgaaaagcgttatttcgacacaaaaggc taagtcttgaatttgcgatgggaaggtcagaagttctcatcacttacctgctgtgagatgtcaaacatcattctcggaaa aaccaaaaacgtaaagaacgaaagaagacgaaacgagctctatttccaaccactgaaccggtacatcataccagaaagag cactctctggaggcttagtactaggacggtggaactcaaaggtttcatcttcacatttttggaaagaacgtccacaattt gctgaaggttatgcatagacccagcggaaaatagtgtttgctacgttcttccagtttgtcatatttttgggtttttggag cgatatttaagtgaaaagtacaaaacaaacagcaagttattggttttgttttgtactcaaaagttagcaggtgtcaaaag ttcagataattgacgcgcgcaccacttatctgaaaacttcacttcaagaaaaagaggataattaatgtcatttcaagtca taagtgtggtttctcaattttcactcgtttgtgcgttcgtgaaatagctcagtctctgtggtcccccttgaaatgttggt atgtttttttccatggctcgcgttttcactctggagaatcagtttcctaactgagaaatttatagcaaaaagtgggaaca cggtgaacatcataaagacgtgcttcttttagtcataccaaaggagtaaccacggacgttaagggttagaaaactatttt ttaagtacactagaaatactgcggaatgaaccaagttcgttgagcttttcatccccttggtataatgtaagctggatgca cgagcgagcgcttcccggtgagccagccactatatccctgtcaaatactattgagaatttcatcagtttacgggttggaa aatagcagttacaagattctccttgtaaaatgtcttgttgttgtgataattatgatcatgtttttttcaaatgaaaggga gaccatagaaatgttcaacagacacacgtcaaatccgtaggaaagtattgtcaagtgcagctcccgcaattggtttcctt tactggttgtacagaaaccatgaaacgcaatgagttaaagataaaagtagcatcgaaaaggctcatctttcgagtcttgg ttcaagtgaacctcaaatagtaattgattttattggtctgtatttgcagtttcatggagggtgctcctagcgcgttcgac tcgagctccaacgacttggcggacgtttttatggatataaccctttccaaaactgaaccaagtgagggtgatggaggaga tctacagtcttgtaaattctcgcgtaaatcttccagcagttctgatacatcctcgatgcgagacgcgacaccaaagcagc ggctgtccacagatagcgaggaagtcaaggaaagcaatgcaaatcacaacagcagtgtcacaactgagtgtgttgtatgt aatgataaggccactggttaccattacggtgtgttcacgtgcgaaggatgcaaaggattcttcaaacgaacagtacaaaa gcagttagaatacacctgtaaaggagatggaaactgcgaggttaatcaaatcagcagaaaccgttgccaatattgccgtt ttaataaatgcttggcacaaggaatgctcaaagaaggtgggtctagtatttgtaaatgaaatttctttaatagtactgta atgatcatcacacactttgggaattcgactcattgaaattgaagaaagaagaagaaaaatagaagaaaaactttgcaact gaggacctctaattttaaattctttttcttcaatagaattgttgatagatggaacagcttacctttcagcgttttagctt taagtttaattcatttaaacctaataataggaaattccttgggtaacggcccatatgtactttttattagcgcgcttgta tattcaatagttttaacttgtggagattcgcttcgtgtggagtgtgtggtacttttgcattccctccaatgaccctgctt tactatagaactcttcggtttttttcagatttatttaaactttttgtacttatgtgccctgaactgcaacaagttgttgt agaatttatttcatattatgtggaccaataaatgattcttttgttttgtgctactgtgataatccatactggcctcaatt tccagcagaaattctttgaatttttgcttatactaaaaaggccagtagaaaagattaaagtaataactttttgactgtca ttgatgatgaatacggtctattagtacaatagttaccatgagtctgcgttcttgaactttttccataattttaacctttt ccagtttcatcacttcctatcagtgatctttatgatctacaactgcaatggtaatgtcaccaaagaccaggttgaatcaa gaaaaaaattcttcattttgtcttcgtttaaccaattaaaaaaaaaggctcacgtctaaggcgtcttgttgggaatgtcc ttccttcaggaatttgttccctttgattttctattcgtgttttcttctcgctgcatgttttcgtgtttgtggtttttgtt tggatgtgttgaaaacgaagaccgaagagccattggtctaaaacgaagactctgtggtgtaaaacaaagatccactaaat atattgctctcgtttctctagcacataaattaaaatgtcacctattggcgtggcaaacttgacagtaacacgtgtcaaat tgtgtaacgcaataaaattccaacagtatagaaatatacgttttattagcctgaatgacagccgctttatgagccaagtg gggcgaatgcgatatttcgcgcggagcgcgagacgaggggaagagaaaaattccttttaccctcgtctcgcgcttggcgc tcgtgtcgcgctccgcgcgaaatatcgcgtttaccccgcttggctcgtaaagcgccagtcatgcaggctaacgttttagt gacgattttgatatatagtgtcaaccgtcaaccgatattctatttttgcgaataatgcgtactgaggaagtgatgcgtca tactttgaatttacctctcgcttaatgtgcaaggtaatgaattcacctcattgtcagttgctcaatacacaatatatata ttgagagaaatgagagaaaattagtgggtcttcgtttaacactacagggacttcgtcttagaccacagagtctacgtttt agaccaatgggtcatcggtctttgtttttgggtgtttgttttcgacgcatccttgtttgatctcaggttttagtcgtttg ttacccagtgtagttttgctaattactttctattgttgctccagctttgttttcctttagtatactttgcgtagtcgtat aattagcgctgtctgtcttttttttttaatcactggatggtttttcgttgctggttgcgcttatttcgcccggctgcgtc cgctcagttccgttctgtttaagttaaaataaatgaagaagcgagttatcgacgcctgtgacttcagcgtgaaataacca agtcaggaatttttattctagaacaccgaagaatggagaaaccacaaatattcatgatggcaaaaatgttcatttgaaat gacgtttcctggtgttttggtcaaacatcacttttcagtctgggcaacgtttttaaattccaagaatgtcgatagaagcc ggattcgtaggggacaccatagtcgttccgccaacgctatcagtagatttgtagcatacataaattctccatagcatcat gttttctatctttcagctgtgagagaggatcgcacacccggaggaagacatcgacatcgatcattgcaggatcatcgtcc gaagaagccccagcgttctgctcgagacgagccaggtacgaacgaggtggtgaacggtgacgattgcacagataagagtt ttgctcctcgctcagctgacgcgccaagcagtagggaagaaacgatggcttttatagccaagatccaagaaaacgtgact ctgataccagaaatacctggtcacagccttgagagtgatgaaaaaccaggttcaaaagatgtcaacaaactaatggcact ggcttatacagaactccagttcgtgattcaatgggccaagggtgtgcctggcttcaaggacctccatcttgaagatcaag tctgcttgctcaaagcttgctttatggatttgaatgtgttccgtttggcgtatagatccgtggcttgtgatccaatgtca gtcaggtttagtcagaatactatccttgaaaaagaagaggttgttgctcttggatgggctgaagaccttgtggatgctac gctggagtttagtgataaattacgcagcttgaatttggatcaaaatgagtttgcttgtctctctgcgcttgttttactta gcccaggtttgttatgtttttttttttttaatactttcgctcggaccctgtcgtagtgttgcttgcttggaaaataaatt tccctccagcagtacatctctgatgtaatcgatgtgatctaatcgatgtgatcgtcgattttatttctcgtcagatacac ccgagctcaagaacagagcaaaagtcgaggagcttcaagctaaagtaaacagtattttgcgcgactacgccgcctcgttg tatcctcataaaccaaaccgccttggaaagctcctgctttgccttccaactctgcgcatgttcagtgagaaggcactgga aaattatgtcacactggagtttttcggtaagttggacatgccaccgttagtggcggagctcttggagtaagttgaagacc gcagcgtgacatctcagctaatggtatgtaacgcaagaaacaatgaatttactgacaagagattctcaaaatctcatctg attgccggggacaaagacgttaacgtatgtaaacgagataaagttttaagaaatctatctaatgtgttgttttaacgtcg tggggactgtttgaagttcgttcgttgtgtgtcttgaagtcacttaaacagagggtttcctctttatgcaagttatagtc gagtgcggcgaaaaagttgtttgtgcatttgtttatgaaataaacaaagcgcctcactggtaggtccccctcttccccaa tggaattggcacgaagcgttgggttggcggctctctcgaccaatactctgtcttgggcgacttttctgcccttaggtgat taagactgtgcgtccctgtttaagtttacctcatatttaacagaaaccgaaacgagaattaaaggatttggaatagagta atgtgacatgttaggatactataagggaccataacagtcaatataaagaaggtcgaaagacaggctttaatgtacaatat aatttttgttgatcttattgttaagggcgtattcttcaaaagaaacaatttatcaagagtttttatccggtaaccagatt ttatgtgaaagtagaattcctctggaagcaaaactactttgttcgtttgtccttttgcctagcaaactcaccccaatagc aaggatatataaaaaccgactggaaccagttaatctggatacgcagtcctgcctttgactttggttagtcttagtccata aatgttgtaaaaaaatcaactagtcattgccattgtcaagcgtgaattaaaatgagagattacttaaaattagttggggg ctagtaagggcaggagtcgacattgagcaaagaatctgtgaggattattttcatatagctgctcttcagcgttttaaaaa acctcgcatatgaagttatgatttcttgtttattataaccaatgtcccttatagtctttacctaagccgcttaccatttt tcagaactggcgggccggatcgctcagtccccaaatggaaggcgtcactttttccgaactgagagaagtgctcagcatca aagtgttcatcctcgaagaactgagtcagtttgaccagaaacagctctcagttcggcagcaatgatgcgtcagttctgaa aaattgttagtgcttcgtgttcacataatcatcaaggaaaattttatctacaagcttgttgtaacatttttattatctgg aacgccatattggatgatgtaatatctcaacttctaatacttgggagcccgaaacttccgagcagtttgattgactttca cgcaacagcagaatgcgtgacaaacccggccaaaataagtagagtgcgtgcagtatggtgctcggtgagttaagataaat agaagagtctctctaagagttctgtgaatgttgaacttgttcgtttaaaaagtgtatcgtttatgtaaggaaaactcttg tagaaagaagagcgaagtacagagtgataaatattcgaatatacaaatgcatatgatc |
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Protein
| Protein ID | aug_v2a.04233.t1 |
|---|---|
| Definition | - |
>aug_v2a.04233.t1 MKLIFYGFMEGAPSAFDSSSNDLADVFMDITLSKTEPSEGDGGDLQSCKFSRKSSSSSDTSSMRDATPKQRLSTDSEEVK ESNANHNSSVTTECVVCNDKATGYHYGVFTCEGCKGFFKRTVQKQLEYTCKGDGNCEVNQISRNRCQYCRFNKCLAQGML KEAVREDRTPGGRHRHRSLQDHRPKKPQRSARDEPGTNEVVNGDDCTDKSFAPRSADAPSSREETMAFIAKIQENVTLIP EIPGHSLESDEKPGSKDVNKLMALAYTELQFVIQWAKGVPGFKDLHLEDQVCLLKACFMDLNVFRLAYRSVACDPMSVRF SQNTILEKEEVVALGWAEDLVDATLEFSDKLRSLNLDQNEFACLSALVLLSPDTPELKNRAKVEELQAKVNSILRDYAAS LYPHKPNRLGKLLLCLPTLRMFSEKALENYVTLEFFGKLDMPPLVAELLE* |
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