Gene
| Gene Model ID | aug_v2a.04232 |
|---|---|
| Locus | scaf1544 : 50214 ... 61175 : - |
| To GenomeBrowser | scaf1544:50214..61175 |
| Genes list of scaffold | scaf1544 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable atp-dependent rna helicase ddx6-like | GO:0003676 GO:0004386 GO:0005524 GO:0008152 GO:0038032 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.04232.t1 | gi|156380897|ref|XP_001632003.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.04232.t1 | gi|449678669|ref|XP_002164714.2| | PREDICTED: probable ATP-dependent RNA helicase DDX6 [Hydra vulgaris] | 0.0 |
| aug_v2a.04232.t1 | gi|545363612|ref|XP_005646927.1| | cytoplasmic DExD/H-box RNA helicase [Coccomyxa subellipsoidea C-169] | 0.0 |
| aug_v2a.04232.t1 | gi|260831524|ref|XP_002610709.1| | hypothetical protein BRAFLDRAFT_202435 [Branchiostoma floridae] | 0.0 |
| aug_v2a.04232.t1 | gi|330846058|ref|XP_003294872.1| | hypothetical protein DICPUDRAFT_93301 [Dictyostelium purpureum] | 0.0 |
Transcript
| Transcript ID | aug_v2a.04232.t1 |
|---|---|
| Definition | - |
>aug_v2a.04232.t1 cagcttgtcacgaatgtatgtttgaaagcgaaagcagaactggggaaaatttacggttgttggcttgcgaaaataatcct catccatcgcactggaattcattatttggaagacatttcgtcctcataggtttaagacaaatatttttctacagttggag ctattctttttgtagatatcgccaggggaaagctgaaattttaagctgtttgtctcgtcagcaatggcaacaacgaaaac ggaagcagtgccatcctctctgcggtctgcaggaaggtaagtcatttaccttgtaatttggtgatcattcaactcgttcc cgaacttctgtaaaatttctcgcctttctgtcttttatagggaaggatctgaagatgactcatggaaggcgaatttgaaa gctcccgcaaaggatagacgcatacaaactactgtaagtcaaagaggtttatcagatacccaatttaattcccgtgatgt tgggtttgtcttgatattagattgggatatacatttaagtgtgtcttgaaaacattctgaaagtttgtattcaagttttt aaattgctttttaaatgcaagcgtgtacgaatataaaattgcgtcgggacgtccaattttcactggcctctgcaaaactt tcgtgtcacgaaatgaataccggtatcaataattataaaagttgtattttatttcatttgctttctcccctcaaaaaaat ttttcttgatctagcttctgtagtcggccaattttgaatagccaaataactagtgtcgacgaagcgcagaaaattaaatt gtttcaaatgagctaatgtatgagatgaaatttgaaaaagtaaggttttttttgtattaaagccattgagagcattaatc gaggaactatgagctcactgcaactgccattgatatttcattcgtgtttttcagtgtgttactgtggagttgcaagtaca tatgtagtttacatatgagaggggaggtttaagatctttttttgatagagttggaagtgttaaaaatctcctttgttatc tttttaaacaggatgttacagcgacaaagggaaacgaatttgaagactatcttcttaagagggagctactgatgggaata tttgagaaaggatatgagaagccttcccccatacaagaggagagcattcctgtagctcttgctgggaaaaacattcttgc cagagccaaaaatggcactgggaaaacagctgcctatctgatacctctcctagagaaatgtgattccaaaaagtcacaca ttcaaggttgggaatgaggaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnngagagaaagaaaacgtggacaaatcttatctgaaattggatgtgaagcggttctgttggatgtgaagaggatctgg agctgtagtgaagtgaagcgaagtgatggtgattcccacagcaatgggggcttcgggtacattctcaaataattaaaatc ggtggctagttaagaccattcgtaatcttaactttggaacccttgaaaaggcttgcgtctgaggaatggctaggattttg agatgtacactgaatgtctaaggctgtaggttgtgacttgatgctcaattgaacaataccagatatttaaaccagtttag ctgtgagagaacaaacaaacaataataattaacagttattcttcaaggacgcgccggatatgagctgatatatataacca acgaggcggtaggccgagttggttattatcagcttatatccggcaagtacgagaagaataactgttttagtaaattttca agcaatttacttgatttttttgggtgaaacctcctcaaatcgtgacattttctttaccaaagacgccgcaaaaaattttt ttccaacctccaaaatttcagcacaagaaagtcgccatcagtttttccttatttggtcaaacttaacgataatgataaaa tcaaatgtaatgtggaactcaagtgtcaatcctggacctcattggtgaagggtgagggctctcacaataatattgttaca atcctgctccccaaaggaaacagtatagtgtatagcccacacatggctatatctttcccctgaagggatggaagtgtatg gcattagggcacagctatatataggctctatagtgtattggtcacctattctaatgttagtgccctcattcttcctctct tttcatatcatttgtatcattgcattcataggatacttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnntgctggcttttacacaacactgctgacggtgcggaaactgtgttcgtccaccttac tttgttgttgctcaaacatgctatccttggttttcacttgacatcaccatggctgaactgagtttctcaagtgatcagca gggagctggtgttattgttagggcaagctgtgcacnnnnnnnnnnnnnnnnnnnnnnnnncacacaatgacgataagtct tgtttttagctcttgtccttgtgccaacacgtgagctcgctcttcagacatcacagatatgcaaagaacttggcaaacac ttgggagttcaagttatggtaaccacaggaggaacaagtctcaaagatgatattatgagactctatagtgatggtaataa taatagagttcactttccttgtgataagggaaatggttaattgaaataataataattagtagtagtcttcagccnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaaagctcaaggctaatttcagttatcaattttcccccaaacaag attttttcatcttaggttgttcccctatctgagtcatacggtatgacaaaaaataggttccccatggtctggtataaggt tgctgtttaagccatgacttggtgatcaaaattacccacacaaaatgagttgagttcttgtttcagattttataaaaaaa accttgaaaaataaaaatactttattgattttgccttcagttcacatcatcattgccacacctgggcgcatactagattt gatgagaaaaggtgtggctaaagtggacagctgtcaaattcttgttatggatgaggtcagtatcagctgttttgattttt aggggtgggtaggacaactgaaatgtactttgtgtgtaattgaaagaatcattaatttctaagctcattaacattcatta attttttccttttatcagtgaccttacagggattggaagctttcttagagtcttgtcagcattctgtaaatttcttaccc caagacaaaaagttattatcattctcttcaaaattataggctgataaactattgtccatggactttaaaggctttttgga agacataatcagcttcttccctcccagccgacagatacttctttactctgctacttttccagtctcagtgaaagaattca aggtgtgttacagggtatttcatattttattagaataagtttatatgttcaactggaaacagtttgggttgaagtttcat gttcaacaacaaaactccttattttaccccagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnngagtacctgcacccagaaataactaaagagttaaaaatgtcagggtgcttcatcaaataaatttattcttag catatggagattagatatacaccaactatcatacacacaaatgtaatatttataatgtttaaaataatcttgtcaagtta gacccagctacaaaggatgtgatgtaatatatccaactgttttcgttggttgtttcagtcaataattattttcaaagtca ataattattgctccaaatctctgtttttaaaagtcaatgaaggactgctggatccagtactgggtttcacaataaagctt gttaacttgtcaattcattaaagcacaggccccagttgttcaaaatgtggagaacgctatccaccaggtaaatcactatc cattggatattgcaattggtttcgctattacttatccagtggatagcgatttatccggtgggtagcgctatccatcattt gaacaactgggaccaggtctcatacagcaaatgaggtgattgacaagaggtaaccatggtaatgataggtcaaacttggc acctgtcacactgtctccacagtgactgaatttatagtaccgccgctcagcattcgactattgtttctgggttgctctcc cacccaccctctcttgtttccatgtttattatatcagtgcagcaggtgcgcttctgcatgggggctcatgattgggttac caggatttgcagtcatggtagcagtctcatctacaagctggctgccaatagttgaagctcccttctagatttctggagca ctcaggctccatttagtgatggtgctattaataaaaataattgctgaccaggaatcctttccaagttaacttagctaaga atgaaactaaaagaactaattacactacaggtgttcatagccttttttgtattgaagccatttttaatctgataccaaaa attggaaaaaattcatcaaaatgatccagaactggcctccttggaaaaaaatgaaattctactaaaaaaattgaagtcaa gtaaaggtggttgatgtcaattacagaaaatcattgacattggtgttactaacatactgtaaatgattgaccagatttaa gattactgtaatgattggttatcatttttaggacaaatatttggaaaaggcctatgaaattaatctgatggaagagctga cattgaaaggaattacccaggtaacctttttcttctttggattcatggtcttgaaatgggtttattgacaaggacttttt tgggccaccccactacccaaggttactgtatgtactgtgtggtcttaagggttttcttcatttttcagttgaccaaagct actgtagtctgttgagcaacccattggtggcagttaatagcaaagttatttctttttcatttgcagtattatgtcttcct tgaggaaagacagaaagtgcattgcctgaacactctgttctctaaggtatgcttgtaatattacaacagttagcattgca atcgttgtcattcctccattaccctgtttgttcctaattggttagtggtgcagttataacaatactatttttgtgtacct taagtgaagcaaaagtacactgtatgttgttccagtgtatatactgacagtttttatttcttttcagcttcaagtgaatc aggctataattttttgcaactcagtccagcgtgtggaactgctggcaaaaaaaattacagatcttggttattcatgctac tatatccatgctcgaatggaacaaagtcaccgaaacaaggtgttccatgacttcagacaaggggagacaagaactttagt ttcgtcaggtttgctttgttcaatgtaaacttaaagtttgaataatgaaacttcaatacatcttttcagagctgagtgtg cacattaagggtagcttttcgagctattattttatttttcacattctagcaattcaaatgcacacttttctataaacatg atgtcagttatgttaatttctccacatttgacaatgatggcttgaggtcatcaaaatgtcatgtaccatttttattgtta attttccttaaaaaatgcaatgatgtcgtataacgttttattatttttgtttctatattgttagatttattcactcgtgg aattgacatacagtcagttaacgttgtcatcaactttgactttccaaagaattcagagacgtatctgcatagaattggtc ggtcaggccgctttggacatcttggtcttgccataaacctcatcactgaggaaaataaatttgatttattcaggattgag aaggaattgaagacagatataaaaccattcccagcagttgtggacaaaaaactctatgttgcagagttccagcaacaaca agaggaagactaggtgtagtataattctggtaggaaaaattgcaagtgtgaaaactagaagggaggcattagtatacgtt atagtaggtgtcaagtttctcagaattgtttggagtgaagattttttgagcaagttgtttgggacaaaagtggcattaag acttaaacaaattacagttaatttaaatgctttcatagatgttgtatttggcatgtgccattttttgtaccagaatggtg aaaattgtctggtagttatgttcatggaccttcccaaagatttgaaccttaaaatattgcagaactaaggtataaaagaa tataaatttaatgtaaagctggaaaatttgcaccgaggtggacaattcatccacataaaggttcttttaaacatttgctg acagtgatcattttgtcatccacttaacttttgattggtaaagtgtcttagaaatttctagcatttccttggcatttttg tctgcaagacattaccaggtcgttagttgagtgtaatgttgcagatttaaatttgctattgttatgtttttgtgaagtca ccttgcactgttgatccttactcttgtattgtaatcagacaacttttcctacccgaggtacagcaagtgctttgaaggag caaggcctgctttgaaaatgtacacccaatgaagacgtaaagtatttattcctttctgatattcagaaggatcacattgt ttgctctagttttgtgctgagctgtgttgtgttgtaagtaggtctagccttttcactatcaccctgctataatatcatga ttaacacaaattgttgttacttaaggcttttgccactgtgtgttagtgagctccacaaatcattcctacaataattcttt gtccagaagaggatgcctttggatgctccttaaaaatttgcgttaaatgttgctgtggtggtagtaccagtatgttttta tgttgcaatccattgtcattctatccttgtagtttatcactggaattccgttgtagtctcctttgttgatattgtaggac cacctttctttatttttctgtggcttaaagctggtgttcatccactctctatttctaatttctgagggctacaaattgct gaggattgtgttgttccaatgttaacaatcttggtcttgtagcagaggtggttactaacggtccaaaaagaaggctgtgt ttgtttgtttgtcgttgttttgttttcttttcttgtacaagtgtatactcaaagatctccatgcctctagcaaagtggtt tatttaggatgtgtaacatagagaagggcaacaatggattcatgtaggtacaagaaagcctaggctcatcttaattcgtt atttgaacaacagcgtgtgtataattttgaatgtggggtttgtattgttcattattgatgaggaagtggttggaaatatt ctcctggtatgatcttgccctcttccccctttgacacaacaaggttagtagctagtcattactttgatgaagcaacacct actgttacttaaaccagagggaaatacattgtaagttaagggagaaggaatcataataatattataagataagaatgagg cagtggcttattgttgctgacagttaacaatggatcgggaaagaagagaagtttatttttacatgcaaaatgatcagtac ctgcaggggaaagagatacatttttttttttaagcaaagggtttggcagggttgtccacttgggagaaaattgcactagc atggctctcacaatgaattaaaatgtgagttagaatgagtgaagcataagatagtgaaaagaaggaattgaaagacagca gaatgagtaagtgtggagattctttttcattattttccttgtaaaatgtgtgtcgttatttatttgtgataagtttgtaa atatgtacatatacagtatattacaaaatctttgagtttctgaaattttttcagaagaatgacagactgtgagaacagaa aagtagtttgcttacagtggaaagcaagctgcttattgtagagaagagaattgctgaatcaaaccacaaaaaacaacaca gattgaaataatttgacaatcaaagtattgaactcttgaagttagtagcaacaagatttgaataacaatatacagacaaa atgatgttttaattaatgtcattggtaagcatccaatatatccccacatagtagagctgtatgtttattgttgttcagat atcactagttggctaagggtttgacgttatctgcaattgatcaaaagtgaaacaaaagtagtgatttcataagggtttga agtttttttgtggtttgaatctaagatgccatatctgggaaagaaaaaatattgttttcagcttttaatagtttgaagca gaagtgatttctcatgtattcctgaaacagcttcccagattctgctttttgtggagattacaagatttaaagttgccaga tgttgcattctccacttaaaactgttattttgacattacaaattttatttttctatcaaaaatcaggtactgcaataaaa taagattttatgcagtcgaaagtagaagatcatttagttcaatgggggaaactttttttgcaacttttagattttattaa ttaggggacattttgaacattggtctaattaagagagaggaaaagtagcattgaggaattgccttatctttgtgaaggat actcttattgaaatgtggacgtttggcgtattcagagtaaaaggtatctcttcaaacaacttgaaggcacagtttgatgt ttctaagatcaaaaatgcaaaatgttagttactgtctccgaattttaatatcatcaccatgaaaaactgttcaaaaagct gcaaactaaagtttcttttattaagcatctaccttgccattgaaacatctggtggctgcttaagatacttaagcccttga taattaagcgactactattaacggtgtaagattaaggtcatgaaaagtggtggactcttacagaaaatttaatgtctcct tggttttgttttcattggaggcattacaaaattctttagttaaatttgctttcttttttcagtctggacttatttgcaat ccaaggaaacaacagcaagtcttgagttgcatatgttcatacttgtgattgaatgtaacccttgcattctcagttgttac cttttcactgaagtgtgaagttgattttttctcctcatcagacaactcatcatagggataacaataaaattcttgatgtt tcaagttacagtacctttaacactcctcgtactgtaagtaaattaatatttgtgctgttagaaatactcttaacataaga tgcaaacttaaactgatttcagcaaagatcttagtagcagatgaaagaagcaaatgaaatgataagcttctttagaagat tcatacaaggcatacaacttatgtctgcccaatactgaaaaaaacagcacatcctgaattcagtttccaaaataattcca catgcagttatttgcaatgcatgatacatgcactggtaaaagatttcaaagcctgtggctttcactgcaatggcttagga attcttacatttcagtatattttagttccaccagtgaagtttagtttgctttcagaacactttgctattcttcaaaagtt taatagtatagttgtagccattgcttgctattgagttggtttttttctttgcaattgctattattgagctcaaaagttca gtttttgcttctgttgtcaatgttccttggtgtattgtcagtaattattgggatttgtcttaaggttgtggaagttcttt agatagtaagctctattgacaataatgaagctggcaaaaatcatgtaaaagtttataagtgcaatctgtttctttctttc aaggctaaatgtgttttgacttttgtgtttcgtagctttaaaaaatattatttcttccttcgaagaagtaactttgctct gctatgatttgaaaaaaatactgttacttttgttttgtttcagttagtgtttaatcttgattaacaatgtgtaggtcctt gctcactgaacatgggatagccagtctgatgtggacgtttggttctcattctaagcaatagcaacctaccaaagtagcat tttacattatggttttttggtacattctacacaattttcccccaatttagttcaattaaaatggaacaaaatttaacttc tctcaaagaaactatttgatttttcttcgattttgttcagtgagcaaggaataaagagcaaagatatctttcacccaagg gaggttataccgcaatttatgcaatctgtgtaataatttccagactttgtattaacaaaattcctcaacacttagtgtgc aaaccactcggaatgaaatatctgagatatcaagttacataagatttcttggtttgggtgaaagattcctttgcaaaata tg |
|
Protein
| Protein ID | aug_v2a.04232.t1 |
|---|---|
| Definition | - |
>aug_v2a.04232.t1 MATTKTEAVPSSLRSAGREGSEDDSWKANLKAPAKDRRIQTTDVTATKGNEFEDYLLKRELLMGIFEKGYEKPSPIQEES IPVALAGKNILARAKNGTGKTAAYLIPLLEKCDSKKSHIQALVLVPTRELALQTSQICKELGKHLGVQVMVTTGGTSLKD DIMRLYSDVHIIIATPGRILDLMRKGVAKVDSCQILVMDEADKLLSMDFKGFLEDIISFFPPSRQILLYSATFPVSVKEF KDKYLEKAYEINLMEELTLKGITQYYVFLEERQKVHCLNTLFSKLQVNQAIIFCNSVQRVELLAKKITDLGYSCYYIHAR MEQSHRNKVFHDFRQGETRTLVSSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLITEENKFDLF RIEKELKTDIKPFPAVVDKKLYVAEFQQQQEED* |
|