Gene
| Gene Model ID | aug_v2a.03298 |
|---|---|
| Locus | scaf1164 : 23596 ... 29688 : + |
| To GenomeBrowser | scaf1164:23596..29688 |
| Genes list of scaffold | scaf1164 |
Manual annotation
| Study field | Cell Cycle |
|---|---|
| Gene name | Adi-cyclin F |
| Description | Named thus because this protein shows similarity with Homo sapiens cyclin F by the BLASTP search. See Homo sapiens cyclin F (CAA85308). EST assembled sequence corresponding to this genome region (adi_EST_assem_15645) codes F-box-like domain in addition to cyclin_N and cyclin_C domain. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-f | GO:0007049 GO:0044424 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.03298.t1 | gi|260800992|ref|XP_002595380.1| | hypothetical protein BRAFLDRAFT_119004 [Branchiostoma floridae] | 0.0 |
| aug_v2a.03298.t1 | gi|676490678|ref|XP_009065348.1| | hypothetical protein LOTGIDRAFT_108005 [Lottia gigantea] | 0.0 |
| aug_v2a.03298.t1 | gi|696962373|ref|XP_009569356.1| | PREDICTED: cyclin-F [Cuculus canorus] | 0.0 |
| aug_v2a.03298.t1 | gi|348585549|ref|XP_003478534.1| | PREDICTED: cyclin-F [Cavia porcellus] | 0.0 |
| aug_v2a.03298.t1 | gi|706105892|ref|XP_010202364.1| | PREDICTED: cyclin-F [Colius striatus] | 0.0 |
Transcript
| Transcript ID | aug_v2a.03298.t1 |
|---|---|
| Definition | - |
>aug_v2a.03298.t1 tttacctctagaaatggagactttggtatctaaggatatcttgttgtaggtgaacaagtcgatgttgtactgtgtgggaa aaattcttagcttgcatgaggtatgtcaatttttccaaaggatgctaggaatttattgtcacctaacattttgtttgcat ctccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcacttcaatgcagtaaaaacttg atctgtacaccaccttgtatccctgacattttcctgtcaagggtttcagtagaagtcagcaaccggcaaattttgccacc tacctcccaaattatcacctcctactttctacatgaaatttcatttgatttgtcactggtgttacttaatgagttttaag tactgaatttgatctcagaatgaaagaaatggcaattctgggcctctaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnttatttcaaatttagaataatattgcacagagggtgcatttgaggccagtgcagttatttaaagtc attcgcaaatcttgcctttatatgtttgctttttcaggattttccaagccagattgttcatattgctgtcaactgtgtgg atcagtacttaatgagacgtaaagttcagaggtctgagcttcaacttcttggaataacatgcatgttgatagttgcacgg ttggtttttactttttttctaacgtgataaggaaatgctaagtaactcatatgagacacttatctgagcttgacttactt tttgttgcatgcagtattaagcataaagtattgcaactcctccacctaccactgaagagagggtattacctccagatgaa tgttgcataatatttttgcattcatttgacaattgcgtcctttcaaatttcaggtttgaattaactcattgcattgtttt ttcgcaataattataatgtgtgctatgattaattggtctgttttgtggccatgggacatttgttactttataacctgcta aataaattcaaaagtttgtctccagaagagaaacaatgaaagaattagtcctagtactgaaacagagaaaaaggtggata gcatagaagaaaatttaccagactatctacttcatttctttaaatttttggacgagtgagagagacaaaaagagaaagaa gagcaggacaaatgtattttgagtcatagaaatacatgattttattgtttgtttttccttttcgatggaattggcccagg cacaaagcatgcagaccacaacttgaagaggagaacccctcaaagttagttagtaacaactgtattgtgatttcagattt caaggtacagatattgtgacaatcagagaggctgcctggttgacagatggaacatataaatatgaagaagttgtaaggta cagtatgctaattgatgttgtagacagtctaaattaaagaaatccaaccctattttcagattttgaataatctatggatt atactgtagtactgtaactgtttccattctagtaactgttgttaataaacttggttatttgcttatatttttgtgtgatc tctcttttctctccctttttgcaatgttgcagaatgatgggtgaagttatgtcatgtatcaaaggacaagttagggtaag ttattttctggacagcatacaggacttaaagtacacattgaatataactacagcatttctcccctgagtaattaattctt caagttctgatgaaacccaattccctttatatattaaactgtatcatgccttactttcttgtttttcattttataacttt gttacatgtttacaggtcctcaccattcctgattttcttcagctgttttgttccctgggtgcagtaagtacaagtgcttg ttttgctgttgttttcacgacaataccaaataccaaataccagcatttcacaatcctaatttaatcctttgaaaccagac atctaatgaagatttcaataattttgtcattttcattgaaataggtttgtccaaagactgagtgcattgcagggtatata gcggatttatcaattttacacacagagtgtggaaggtaataaaactcaactccttggtttcttttattgttagtaatagt ccatgatcattggtttataattagcacttttgattcatccttgagataataaccttttctctctttgttttttcttttct ttttgtgcagattctctccagctctgatggctgcatctagtgtcttattggcaaattcaatccaacaaattggtgagtgc tttttctctgatgactatcaaggattcacaaaattaattaatgaactcaaggaagctgtaatatttgtggattctcttta cataaggttaaattgcaaactcattgttttcatctcccactataggtacaagataatgacctgattcagggggtgggggt agggataagaatatgatcgactgatgtgcacaacctgactccccagtgtgtgagatgtaggaatgataactggaattact ctaataatgttaatcctgttcaaggggccttaatattaaattagactagttgttcacatacgtaggaaccagtttttcct atagggaagccacatatgattatgaagggatctcaccttgtctgattctcttgcattcttctcctccgacagaaaatccc tggccgcaacacatgcgtgaaatgactggtctgggaattgtgcagcttttggattgcacactgcatttgcatcaacaatg gtatgaaggtgttcttctgtcattgctttgattctcatttctttaaattgatgttcatttctttaaattgcatttaatgt cctattatctacaagcttataatctcagaacatcacactggagacaatcatagaagctggaattcatcaccatgtctgag atgaattcgtaacattagcaattgctaaggcaatggtactcctgttatatgcaaagcctgcactgagatgacactgtcca ctccttggnnnnnnnnnnnnnnnnnnnnnnnnnncctacatttctgcttccgcagtttacttgatgaataccctgtagat catagaaatgtcaaactaaaagccatcaaagaaaggtttgtctccttctcactctttttgtattgtttttgtttggtctg ctagtactgctttgttttaacttcatttatttttgttgtggtcgttctatttttcacagtgctaagagtttgttgtggcc tttgcaatcagttttatggttttctattgtttttgtttataggtactcagatgagcgttttatgaaagtcagcgaaatga aggtaattcaatttttgacgttgttgtagtcatctatattttgacgtaccattcttatttagtctgttaccttttgtgtt tttgttgacaaatgcattcacaccattcactctgttattgacaggttccaagtcgagaagaaatgcgtcgatatatcctt cctatagcccttcaatcagagcttcaaagagaaaaacactctgggtgtactgacagaggcaattcacggacaagatgtac gtcatatgcacaacagaccactgctgatgacaacatgttaaatgttagtatcagtagcctgtcagagagtggctatgatg gagacatggaagacgaaggagacttgacagttgatgtgttcgcagatgaagaacttagcagtgaatttgtcgatgaggag aacagtgttttgaataaacaatccaaagactcgtctttcttgaaatgggatgtgttttcaaggatgagttcaacaccaag cattcttcatcctacaggttttgatggtgcgttcgatactgaagttcagaatatggaaactgactttgaacctgtgccaa tagataatgaaatctgcagtgctaatgagctctgcacccctattgccatggaaccaaatgaagctatggagttaggagag agttgcccaaggccaattgcatcaaatattcagagacgacaacctctaagagccattcagaataatgtttgcgatagaac ttccatgaatttaaagtctcaaagaaggggttctgcatggacgagatctgtcacaaattgaactaaagacactattactc actgatacttctcacaagggatggaaaaaaggaatattgtaaataaagcaaaagcattgtgaaattatttttgtatacca aaggctctttgcaactcaaagtgtctgtttacttatccaaaataaactaatatgatcaaatccaacattatatccatatc ctgggcattttgcaagtccacatataaaaagaaaaaatgttttctgtgtgtatacattttcaagacttgctgtttaaaaa atttaatgggctttttagaagttccataaataattattgatggaacttctgaaaagcacattaatttttaattattatca gttgttgctaggagagggcattaaagtgattttctcttattggacacatcacttaattgctttgtgttcttgtgcttcag aaaatggcaccttgcagctgtttcacaaatgtaaatgttgttaataaaagaaaaattgggtatggatcaaacgatgtgcc acgtgtgttccaa |
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Protein
| Protein ID | aug_v2a.03298.t1 |
|---|---|
| Definition | - |
>aug_v2a.03298.t1 MLYCVGKILSLHEDFPSQIVHIAVNCVDQYLMRRKVQRSELQLLGITCMLIVARFQGTDIVTIREAAWLTDGTYKYEEVV RMMGEVMSCIKGQVRVLTIPDFLQLFCSLGAVCPKTECIAGYIADLSILHTECGRFSPALMAASSVLLANSIQQIENPWP QHMREMTGLGIVQLLDCTLHLHQQCLLDEYPVDHRNVKLKAIKERYSDERFMKVSEMKVPSREEMRRYILPIALQSELQR EKHSGCTDRGNSRTRCTSYAQQTTADDNMLNVSISSLSESGYDGDMEDEGDLTVDVFADEELSSEFVDEENSVLNKQSKD SSFLKWDVFSRMSSTPSILHPTGFDGAFDTEVQNMETDFEPVPIDNEICSANELCTPIAMEPNEAMELGESCPRPIASNI QRRQPLRAIQNNVCDRTSMNLKSQRRGSAWTRSVTN* |
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