Gene
| Gene Model ID | aug_v2a.02698 |
|---|---|
| Locus | scaf892 : 75406 ... 81422 : + |
| To GenomeBrowser | scaf892:75406..81422 |
| Genes list of scaffold | scaf892 |
Manual annotation
| Study field | Autophagy |
|---|---|
| Gene name | ATG10 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.02698.t1 | gi|156378316|ref|XP_001631089.1| | predicted protein [Nematostella vectensis] | 8.40779e-45 |
| aug_v2a.02698.t1 | gi|676457611|ref|XP_009054707.1| | hypothetical protein LOTGIDRAFT_67210, partial [Lottia gigantea] | 2.00386e-43 |
| aug_v2a.02698.t1 | gi|260795281|ref|XP_002592634.1| | hypothetical protein BRAFLDRAFT_124097 [Branchiostoma floridae] | 6.99949e-42 |
| aug_v2a.02698.t1 | gi|686606718|ref|XP_009279865.1| | PREDICTED: ubiquitin-like-conjugating enzyme ATG10 [Aptenodytes forsteri] | 5.0e-38 |
| aug_v2a.02698.t1 | gi|690462327|ref|XP_009330050.1| | PREDICTED: ubiquitin-like-conjugating enzyme ATG10 [Pygoscelis adeliae] | 8.0e-38 |
Transcript
| Transcript ID | aug_v2a.02698.t1 |
|---|---|
| Definition | - |
>aug_v2a.02698.t1 cctcatcataattgaaattaagatctagtgtgaagtctagtttgctcaatgtcttcaaaagccatagctctcgaatgacc ttggttatcctgtgcctcacgcaatctctgtcacgcactttgttttaccaaaacagctggctgaaaagagtttttcaagt tgtttgacggcagcaaagaattatttgaagtctcaaattatttttgtaaacgtgcaagccaagattccatatctgacgag ctgtttctcttcagaactattgttttgaaaagcagctgccttgtcagtattacaataaaaataccagctcaaggtgttac gtcacttccgtagtccttggaaaaggtcaactgaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnattcgacgccccaggctggctggatagggatccatatggcatccatacgtcttcactgtcataataataataata ttacatttatgattcttgcattgctgtttggtttataagcagtgtgtatgtattttgcaggataaaaggagagcgaaata cctggtaaagcatgattttaaactgaggaaccatacagtgactgaggatgatgcagcacggcaaagtatcgaggacaaga actggggcttgaaggcagaagatgataatgatgtaatgaattgtcttgattgactactttatatcttacaggcctcaata gtccaaaggtcggatggtactatcttttggccaaattttaatatactatccattgtataaatgatagcaggggtggtgta gtggtgggagtgcacgcttctaaccaatgtggcgtgagcttgattcctgctctcaccatcacttgcgcatagagtttgtt gttggttctctccttgctcaaagagagctttttctctgagttctctggttttcccctttcctcaaaaaccaacactgcca aattccaatttgatacagaatgcacaatatactaccaatattggtagcttagtggctagttctggttgcctggggccaga tcaatgtgaatggaccccttgttgcatagatttgagatatttcttaggcatttcattttcagctgctttaagatgtcttt agtatgtattattaaaagttccagtttaattgtggaaagtttcattgatttgaaaagtttgtgctgaatggttttggaat ggtcatctaaagcaattaccactccgtttgggtggcaacatgtgtagaattattccattgcatgatttttacaaaattat ggatgagaatgttttttttcctttcgtttttaagagttgtgcattatcagtcaaccactcgtcaaatgtgaatgatgaat tcattaagtatgagtatcacattgtctacagccacagctatggtgtacctgtgttatatttcactgccagccaacagggt aggttcttatcctatgaaagggtttctgaataaatttgtgaagaattggtactagcactcttagtgaaatgtgaacaatg aattaatattgcaagtgagtagcgacataatcattatgtagaagtgggtatgaattcatcactttttaccagaatgcatt gcatttaaccagagtgtaattggcgcccctttttaccagagtcacaccgtcgagctgtccttgttttttgcgtggatttc agtgaattaagtaaaccaatccagtgctcagacagaatattatttgaggtgggaggggtgctcttaaatcttagttttgg taacaccccatgatttgactctattttaagaaataaaggttcatgtaagtcttggaagcgcagagattgataaatcattg cgtaaaatatatcactatcaacagaatgtgctgcagcattactatcatgtggatgtcttagtttttatgtgctgtatttt ttcctgtgatcttttatattttatatgtgttatcttttgaatactcaaggcagaactgtttttgaagacttagtgtccga aagttattttcaatttgtgcataacaaatatgaccagtttaaaccagtttggttactcattgaagttttgtaatcgatag tgtaattgccttaaagttccctttttttgttattgctgtttactttgtattaaaacttgttatgtttgactttgttgggg ttttgattggccttttgaaaatttgaagcaaataaaacttgttgaaagttcagtagcatacaatagataagtagagtggc gatagaggtgggaatgttgaagacatattcaagtgaccacattgcaataattggtagcactttgaaaagatgtctcaagg tgtccccttattagtgtaggaacttcctctgccactgtacaggtttggttatcatgaggaagatactctgtgatgcctac acaaagtggcaggaatctcattatgtctgtttattataatttggacaaaatgattgatatattgtcttgctctatcatga aaatgtttgaggatggattttattaaccattatggttatgcagtgaaaattaatcacgaaaaagaatcaaaatgaaattt gaaatgtcactaatgagcgaatgagcgaatgttagaatgatatatacacaattaaaggaaagattttacacgtaacccac tgggaaccgggaaagatccaagccccagatgggaattgaacccatgaccctctgtagactagatcatgcatatgggggct catgagttcgattcccatctagggcttggattttccaagttcctgtgggtccaattgtaaaatctttcatttaaatgtca ctttaaagttttctttttttcaaaagatggcaagcttgttaatttggaagaaatttggaaaagtgtgccagaggtgtata ggaaaagactcgaatatgaaaagtggacgtttctcacacaacaagtacggtttaatagtaagcaatgatatttatcataa tattgaattatgcttgataaatttgggagtcatctttggtgtaagaacctgtcgaactcccagatgatatcaaagaaagt aaacaaaagaaccaaaccatagcacaagctattgaaacaaagagaaaatttcactggttcttacagtgaggtaaactcaa atttgggtacattttaccatgggaaaagggaagaataacatccatttacatcgccaaaaaaattataaattatggggtaa tggcaagaacagtctctttatttaagtctttttgctgtttatccaagctagcacaattattgttgctaattattgtgggg acaacaagtcaaacaattattaacattaaatgtaaatgcaatgttttctattgtgaaaatccctgtgtcttgtgagcata attaaaaggtaatgagggaaattagagaataatttctcttattaatttgtaatattacttccctcaccaatctcatatca actttattcatttcaattaaactgaataaaagctcaaagcttgggtaattgagaatttggataaaatgccttttacacaa atttttaatggctattttgaatcattatttcgattacctacatagtacaagttgagtaactcaactatctccagttgatt ttttttttctgcaagagctgcttggtagcaatccggggtcaaaaaatgtgtcactgtggcagggtagttgctttcacaat aaatagtgacagacattcaagagagtggttttcctcttttcaagcttgcatgcactccttgtacttaagaagacaaagtg tgaaatcgctgaagttaagtcaatctgtagggtaaaaggtgcatcaaatttcaaatcgtcatcttaatcctctgtcggca ttgttctcttttttatttaggagcatccctatctctgcgttcctttttaccaactgcacccttgtcacactgcagacatg atgaaagcagcatttactgcaactgcagatcggtgtgtatcgtaacgtagaaggcccaacacggcgtggtcttacagtac atctttaagaaaagagagcttttagtaagcaacactgttgagtaatggacagaaaccgcaagtgacgtcacctttcattt tcacatgcatgccagcagagtggtctcttctatattttcaaactaataataattattgtctccactagtgaaaagataat tacctatatatatgtggtggtgtgaagactagtaaaaaaggaaaacagctcccttccagctgccatctgcgagtcaaaaa tgttatgtgcataagctgcctaatggctcttgacctcagacctcacaaatgttatagctgcagaccactttcaggcttac caaaacccttgtaataaaaattattattgctgttgagtatatactattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaagtttttcattgcaattaataatttcattgttttatttcaggcctg tcaactaccttgtaacatggcttagtagtgtgggaccagtcattggtcttaacctttccaatgcctattctatgtagatt cataggtttttggataggatttcgaatgttgtcactaatttttttctaataataatggattactaatagtctcaagtttg aaaaggtacacaaagtgaactgtacatacatttatatgagaggctgattcagcaaaagaatgggaatgtcacttgacgat ggtgagtgcaatgcaaacacccaaatgtggtcaaaatggcagactattctgcaagccctcccatcgctacctgacatttc agtcctgttgctaaatcagcctagaataaatgtgttgtcaccgagcttcaaattgagtgaagggcatgtaccatcccaaa tcaatgtccacttgaaacaaggaaattaagacattctttgtagctgtttagttaattgcttgagagcacattcctgtttc aatctagtatatatattttaaagcagactgggatatgtttaacaaatggacaccatgttgccacgtgtctgttcagtaat agatcacagatgatgtc |
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Protein
| Protein ID | aug_v2a.02698.t1 |
|---|---|
| Definition | - |
>aug_v2a.02698.t1 MTLDKRRAKYLVKHDFKLRNHTVTEDDAARQSIEDKNWGLKAEDDNDSCALSVNHSSNVNDEFIKYEYHIVYSHSYGVPV LYFTASQQDGKLVNLEEIWKSVPEVYRKRLEYEKWTFLTQQEHPYLCVPFYQLHPCHTADMMKAAFTATADRPVNYLVTW LSSVGPVIGLNLSNAYSM* |
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