aug_v2a.02598: Genome browser

Gene

Gene Model ID	aug_v2a.02598
Locus	scaf851 : 9772 ... 14926 : +
To GenomeBrowser	scaf851:9772..14926
Genes list of scaffold	scaf851

Manual annotation

Study field	Autophagy
Gene name	vps15-1

Study field	IP3 pathway
Gene name	Adi-PIK3R4-5
Description	Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Homo sapiens phosphoinositide 3-kinase regulatory subunit 4 gene.
mRNA evidence

Annotation by Blast2GO

Annotation	GO
phosphoinositide 3-kinase regulatory subunit 4- partial	GO:0000166 GO:0004672 GO:0005768 GO:0005930 GO:0006914 GO:0007034 GO:0016310 GO:0016482 GO:0035032 GO:0044425 GO:0044712 GO:0044763

Blast Hit to nr / sp

query	Subject ID	Subject Name	evalue
aug_v2a.02598.t1	gi\|594038684\|ref\|XP_006043952.1\|	PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Bubalus bubalis]	0.0
aug_v2a.02598.t1	gi\|511926728\|ref\|XP_004782481.1\|	PREDICTED: phosphoinositide 3-kinase regulatory subunit 4 [Mustela putorius furo]	0.0

Transcript

Transcript ID	aug_v2a.02598.t1
Definition	-
>aug_v2a.02598.t1 cgagcattactttagtgacctttcagcctttgagttcgattgcaggtaactaaagttcaccttcctttgtcgcaaggacg ctcagcaactgagtgttggtttttcattgtaatattaattttcttcataattgagtattgttgcattactgtaaatctcg tttttctaatcgcttttagttttgttctcaaaatcggattattttaatgattatgtccataaaatgggacagtggagttc actgtatggaaagataaataagtatcacaagataagctttgaacaactagggacaggtgttgaaataggtaccaattagt tctggggttaactctgcagtgaactaccatcctgtaccgaagatgaaattattaacaactttgttactttttctttcata gcttgggaagcacacggttttttaaagttgctcgtgcaaaatgtaggtaagttgaaattgcttcaattataaaagttcca tgcgtggttaggatgatttttaacttcctccagctccttccagatttttaagggattgtgtgggagactaacnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnncgggaaaaccaacatctctttgttgttaaataggttaaattggatttatccacattaaatggaatagat ataaatgcaaatgtatacaaagttcctgaattttgcaacatttcactggcaaccatggatgttggtggagtttctctgtt ctctactctgctgtgagagtttttttctgtggtatatggtattatactccagttttctttaaacttgttcaaaaccaaca gttgatttaatttgatataccagtaatatgaatagtagtcatcacataattagacgaataacgtagatgagaataataat aataacaattatcattattgttgcctgtcatctccatcattatcatcatcataataacagtaattagtaaatttttagct caggataatgattttccagctttctgattggttccctaagcccatgatatgagccattatcattaagtttgaccaaataa ggaaaacctgatggcaaatttcttgtgctgaaatttttgggagttggaaaaaattttttctcggcgtcttcagtaaagaa aatgtcacgatttgaggaggtttcacccaaaaaaatcaagagaattgcttgaaaatttactaaaacagttattcttcttg gacttgccggatatgagctgataataaccaactcggcctacggcctcgttggttatatatatcagctcatatccggcgcg tcctcaaagaataactgttaattattattgttatagaaaagtcaagtcttgtaacaatgtgtcattattattttattatt tacacacaagagattttaacttgtacgtaactcagttttaaatgtttctttatagagaagggctctgtgtggtgaaggtc tttgcaattcaagatccatcccttaatcctctaaagacataccaagatcaactcacccagatcaagaacaggcttgctgg tgcttcaaatgttcttccttttcatttctcaattctaacagacaaagccagcctcttgatcagacaatttgtcaaagaca atttatatgataggataaggtgagtttctgatatgtacaagagggcctgcaaattccttcgacaaaaattttgtagaaaa tgttaatacacaggtctcattccaagacatgcattgaaatgaatagtacacgttatctcctttaccctcctcaaaacaca ttaattgttcaatcatagatggatcaacatagattgggggggggactgaggcatgaaatggtcaatgtagtgagacatgc actggagtgtcgcaattttatttgtcatttattgtaggatacattgatggagtaccattgcttaaattgcactatttcac tgccgtaatttctcaacagaatcacttaatattgattgtgtattatttattgaattttctagcacaaggcctttccttga tatcattgaaaagaaatggattgtttttcagttactaagttccctggagcagagtcattctgtgaaggtttgtgaataca tttaaaagtcatgcacaaactacattcaactttatgttgtacgtgtggagtgttgttaatgtccctgaatcatagaggta caggagagttaccttacctggaatgttgtaggtcaaaattatatcattttaattggaggtacatataaagataaggaaga gggtgattgtttggaagtttgaccagttgtctagaggttttgacaaaatggcagtgttcttcctttttattggcacaaca gctggtaaaagagtttttcaaactcagtgttctccatttttatcagcataagaggtaaaatagtttttcaaagtggtcaa gcacatgggggcatctttgctttatattccgtcagctcagtgcataatatggaatagaaatttgcctcattttagtccat taattcatgcaaggtagttttgtccttacatttttatgaatacaaggatgcatgatactcaaaacacttacaacacttgt aagtgccaaatctaaagaatgaagtatattaaagtgcattctctgtagtaatagcaatgtttttgtctggtgaaaggtct gtcatggagacataaaaactgaaaatgtgatggtgacagggtggaactgggttcttctgactgacattgcaagcttcaag cctgctattcttccagaggataaccctgcagacttcaacttcttctttgacacatctcgatgttgcagctgttacagtcc accagaaaggtttttggattccagacaggccgatcagatgttatcaaaaggtgttttaacagctgttgatcctcagtcaa agagcaaagaccatagcctcccagatatggattttgtgaggcatcaacagggaaatctgaccccagagatggatatattt tctgctgggtaagacagaatcagtcaggtttcttaatgcctgatgtcacaaataattttgtgaaaatttaatgtcaggtc ttctcctttttccagctgtgtcatagcagagctgtttaatgaaggcaacaggctgtttgatctgtcagagcttctatctt accgcaatggtgattttgatcccagtgccactttgtccaaaattgaggattcaaatataagggtaggatgaaatattgat aaacataataatgttgataatcactttcttaagggttcaggctcctttttctccaacttaactctaaagcctatgaaaat attaaaataaatatacattaccaaaactagcccaaaccccatatacagtgtagcttaaatctatatatcagtgcttaggc ctaataaatctggtattatttcctgtaatttaagtttgaaacctgatgaggagagagttaaaactgagcctgaatatata atgtaacagtcctctgtagtagatcactgttcaaagcccggtgattgctccacactaatagggttataatgtcaatttct ggcagaggagaactcagactattcttgcaagttataacctttaggcaacattgtaaaaacgctaaaactcacatgaggac attgaattgccaaaattgtattaattttataaattccttgataagaatttttatattaaagcgaatcatttatttgctcc aattcctctttacattcttcttcaagagcatggtattactgtacgaactttctctttttattgattttggtagaacttaa taataagaggctaaagaagacaagctaatgaacaaaagcaattttgttggtttctaggaattagtggaacaaatgattat agcaaagatccaaaaagccgattatctgctgcagagttcatgagcaaatacagaggtactatgtagtgggtcaactgctt tctccatcgttggtaccacctattttaaatctttgtcatcattaccataatcattttctactgtacctttacctcaaatg ttgttgttgttactctgatgacactactgtaaacatatattgtacgtcttccctagtgtagtagttaagggaattagtac tcaggagctcatagttctgactcctgtaatcattctctgtggttgtctcatattcaccactaaaacttttgttacttgca tagcatttttgggcaagcttccaaaaactcagtggcagaggatcagaaactaattgtgatcagaatgtcataggtttgac tccttttctgcagagtatcagtaataaaatttatcgaacaattttttgagagcaaaatatctaactcttctgatgttaga aactgcttttttacatgacagggatcatctttccagagcagttttacgcttttcttaacaagtacatgagcaacttaatg ccatcaaaagaattcccagaaaagttggaattcctaggaattctgaacaattccaagacatgcaaattaggataatccta aaagtttggaattttttagaatttctaggaatggtgaacaagtgactaggaattactgggaattcctaggaattctcagt atttccaagactgaaaaaaaatgtgctgggaatat

Transcript ID

aug_v2a.02598.t1

Definition

>aug_v2a.02598.t1
cgagcattactttagtgacctttcagcctttgagttcgattgcaggtaactaaagttcaccttcctttgtcgcaaggacg
ctcagcaactgagtgttggtttttcattgtaatattaattttcttcataattgagtattgttgcattactgtaaatctcg
tttttctaatcgcttttagttttgttctcaaaatcggattattttaatgattatgtccataaaatgggacagtggagttc
actgtatggaaagataaataagtatcacaagataagctttgaacaactagggacaggtgttgaaataggtaccaattagt
tctggggttaactctgcagtgaactaccatcctgtaccgaagatgaaattattaacaactttgttactttttctttcata
gcttgggaagcacacggttttttaaagttgctcgtgcaaaatgtaggtaagttgaaattgcttcaattataaaagttcca
tgcgtggttaggatgatttttaacttcctccagctccttccagatttttaagggattgtgtgggagactaacnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnncgggaaaaccaacatctctttgttgttaaataggttaaattggatttatccacattaaatggaatagat
ataaatgcaaatgtatacaaagttcctgaattttgcaacatttcactggcaaccatggatgttggtggagtttctctgtt
ctctactctgctgtgagagtttttttctgtggtatatggtattatactccagttttctttaaacttgttcaaaaccaaca
gttgatttaatttgatataccagtaatatgaatagtagtcatcacataattagacgaataacgtagatgagaataataat
aataacaattatcattattgttgcctgtcatctccatcattatcatcatcataataacagtaattagtaaatttttagct
caggataatgattttccagctttctgattggttccctaagcccatgatatgagccattatcattaagtttgaccaaataa
ggaaaacctgatggcaaatttcttgtgctgaaatttttgggagttggaaaaaattttttctcggcgtcttcagtaaagaa
aatgtcacgatttgaggaggtttcacccaaaaaaatcaagagaattgcttgaaaatttactaaaacagttattcttcttg
gacttgccggatatgagctgataataaccaactcggcctacggcctcgttggttatatatatcagctcatatccggcgcg
tcctcaaagaataactgttaattattattgttatagaaaagtcaagtcttgtaacaatgtgtcattattattttattatt
tacacacaagagattttaacttgtacgtaactcagttttaaatgtttctttatagagaagggctctgtgtggtgaaggtc
tttgcaattcaagatccatcccttaatcctctaaagacataccaagatcaactcacccagatcaagaacaggcttgctgg
tgcttcaaatgttcttccttttcatttctcaattctaacagacaaagccagcctcttgatcagacaatttgtcaaagaca
atttatatgataggataaggtgagtttctgatatgtacaagagggcctgcaaattccttcgacaaaaattttgtagaaaa
tgttaatacacaggtctcattccaagacatgcattgaaatgaatagtacacgttatctcctttaccctcctcaaaacaca
ttaattgttcaatcatagatggatcaacatagattgggggggggactgaggcatgaaatggtcaatgtagtgagacatgc
actggagtgtcgcaattttatttgtcatttattgtaggatacattgatggagtaccattgcttaaattgcactatttcac
tgccgtaatttctcaacagaatcacttaatattgattgtgtattatttattgaattttctagcacaaggcctttccttga
tatcattgaaaagaaatggattgtttttcagttactaagttccctggagcagagtcattctgtgaaggtttgtgaataca
tttaaaagtcatgcacaaactacattcaactttatgttgtacgtgtggagtgttgttaatgtccctgaatcatagaggta
caggagagttaccttacctggaatgttgtaggtcaaaattatatcattttaattggaggtacatataaagataaggaaga
gggtgattgtttggaagtttgaccagttgtctagaggttttgacaaaatggcagtgttcttcctttttattggcacaaca
gctggtaaaagagtttttcaaactcagtgttctccatttttatcagcataagaggtaaaatagtttttcaaagtggtcaa
gcacatgggggcatctttgctttatattccgtcagctcagtgcataatatggaatagaaatttgcctcattttagtccat
taattcatgcaaggtagttttgtccttacatttttatgaatacaaggatgcatgatactcaaaacacttacaacacttgt
aagtgccaaatctaaagaatgaagtatattaaagtgcattctctgtagtaatagcaatgtttttgtctggtgaaaggtct
gtcatggagacataaaaactgaaaatgtgatggtgacagggtggaactgggttcttctgactgacattgcaagcttcaag
cctgctattcttccagaggataaccctgcagacttcaacttcttctttgacacatctcgatgttgcagctgttacagtcc
accagaaaggtttttggattccagacaggccgatcagatgttatcaaaaggtgttttaacagctgttgatcctcagtcaa
agagcaaagaccatagcctcccagatatggattttgtgaggcatcaacagggaaatctgaccccagagatggatatattt
tctgctgggtaagacagaatcagtcaggtttcttaatgcctgatgtcacaaataattttgtgaaaatttaatgtcaggtc
ttctcctttttccagctgtgtcatagcagagctgtttaatgaaggcaacaggctgtttgatctgtcagagcttctatctt
accgcaatggtgattttgatcccagtgccactttgtccaaaattgaggattcaaatataagggtaggatgaaatattgat
aaacataataatgttgataatcactttcttaagggttcaggctcctttttctccaacttaactctaaagcctatgaaaat
attaaaataaatatacattaccaaaactagcccaaaccccatatacagtgtagcttaaatctatatatcagtgcttaggc
ctaataaatctggtattatttcctgtaatttaagtttgaaacctgatgaggagagagttaaaactgagcctgaatatata
atgtaacagtcctctgtagtagatcactgttcaaagcccggtgattgctccacactaatagggttataatgtcaatttct
ggcagaggagaactcagactattcttgcaagttataacctttaggcaacattgtaaaaacgctaaaactcacatgaggac
attgaattgccaaaattgtattaattttataaattccttgataagaatttttatattaaagcgaatcatttatttgctcc
aattcctctttacattcttcttcaagagcatggtattactgtacgaactttctctttttattgattttggtagaacttaa
taataagaggctaaagaagacaagctaatgaacaaaagcaattttgttggtttctaggaattagtggaacaaatgattat
agcaaagatccaaaaagccgattatctgctgcagagttcatgagcaaatacagaggtactatgtagtgggtcaactgctt
tctccatcgttggtaccacctattttaaatctttgtcatcattaccataatcattttctactgtacctttacctcaaatg
ttgttgttgttactctgatgacactactgtaaacatatattgtacgtcttccctagtgtagtagttaagggaattagtac
tcaggagctcatagttctgactcctgtaatcattctctgtggttgtctcatattcaccactaaaacttttgttacttgca
tagcatttttgggcaagcttccaaaaactcagtggcagaggatcagaaactaattgtgatcagaatgtcataggtttgac
tccttttctgcagagtatcagtaataaaatttatcgaacaattttttgagagcaaaatatctaactcttctgatgttaga
aactgcttttttacatgacagggatcatctttccagagcagttttacgcttttcttaacaagtacatgagcaacttaatg
ccatcaaaagaattcccagaaaagttggaattcctaggaattctgaacaattccaagacatgcaaattaggataatccta
aaagtttggaattttttagaatttctaggaatggtgaacaagtgactaggaattactgggaattcctaggaattctcagt
atttccaagactgaaaaaaaatgtgctgggaatat

Protein

Protein ID	aug_v2a.02598.t1
Definition	-
>aug_v2a.02598.t1 MVTGWNWVLLTDIASFKPAILPEDNPADFNFFFDTSRCCSCYSPPERFLDSRQADQMLSKGVLTAVDPQSKSKDHSLPDM DFVRHQQGNLTPEMDIFSAGCVIAELFNEGNRLFDLSELLSYRNGDFDPSATLSKIEDSNIRELVEQMIIAKIQKADYLL QSS*

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OIST Marine Genomics Unit since 2008