Gene
| Gene Model ID | aug_v2a.02357 |
|---|---|
| Locus | scaf779 : 7250 ... 10945 : - |
| To GenomeBrowser | scaf779:7250..10945 |
| Genes list of scaffold | scaf779 |
Manual annotation
| Study field | Retrovirus |
|---|---|
| Gene name | Adi-Retrovirus-related 73 |
| Description | This gene model contains Retrotrans_gag and RVT_1 domains. |
| mRNA evidence |
Transcript
| Transcript ID | aug_v2a.02357.t1 |
|---|---|
| Definition | - |
>aug_v2a.02357.t1 gaggataaatcatggcaacaaatggattacagccaatgcctttgtttgaacccaaagcggatccaacgaatacaagtgct cgatggactcagtggattgagcgttttgacacgtaccttgtagcttcaaatatcaaagatactggccgtaagcgagcact gcttttgtatcaagcagggccagaagttcatgaaatattcaagactctaccggatacgggagacgaaaaggattacgacg cggctgtgaaagccctcacgacctattttgaaccggacaaaaacaaaatataccaaacgtatacgtttcgtcaagcaaag cagcaagacaacgagactatcgacgaatttcatacacgattgagacgcttagcaaaacattgtaattttcctgatgtcga cttcgagattaaaatgcaaattgtgtgcaacggtacctcatctcgccttcgaaaaaaggcactgaaagagccagattatt ccttaaatgatatgttgatcgacggtcgaaagtctgaaactagcaatgctcaagctagcggaatggaagaaaattttaaa gaattacaagttaaccagctcgagcaaaaacctgcaacgagttctacgtgttacaattgtggatttgcttacccacattc caagccatgtccagcagcgaattcgacatgtaattcttgcggaatacgaggtcatttttcgcgagtgtgtcgcaaaacaa agcaacgtcggttctcaaagttaaacgaaagcacaagtgatgatcgtacatctcgccaccgacagcgtgaaccgtacaaa cgacaaccgaggcaaaccaaagatgaagatcgcgctagaactattatcaagcagtcctatacttcgacggaatccagctc tgacgaggattacgcgtatgttgtggcgaagaaacagaatccaaagattaaaacaagcgttcgtgtaaactccgtgaatg tcgatttcattgttgacacaggcgccactgttgacgttatcgattcccaaacatattaccgactgaagtctaacgttaca ttatcccgaagtacaacgagaatattcgcttatggctccggcaaaccattacccctcaaaggtcaatttcaagcattgtt cgaatctaagacacgatataccgtttcacaaatctatgttgtcgaaggtagcgccgggaatttacttagtgcacagactg cccaggatttggcgttaattcaacttgtaaacaaagttactgaatttaatgaaccgcctccctcgcctgaaaatggccaa acgaatgccacaggaacaaaactaacgcgcctatcaccagcggcaagccccgcatcactcacagtaccaaaatgttcaga tctcaagattcaacaaattattgaacaacaacacaaaaccgttttcatgggcgaaggtaaacttaatactcaacaagtga agttacatattaacgaaaaaattaaacctgttgtccaaccacagcgcagaataccgtatcatatgcgaaaagaagtatcg atggaacttcaaaaattagttgatgaggacatcattgagaaagttagtgatcaaccaacccatcgtttgtactcctaaaa aggacggtggaactcgcatatgtgttgatatgcgggcagctaatcaagcaatcgagcgtgaaagacatctcatgccaaca ctttcagatttcagagcggaactgaatgggtcaaaatacttctcgaagatcgatttaaaacaggcttaccatcagttaga attagcagaagaaagtcgtttcataaccacattttctacgcatgagggcttattccgctataaacggctgaactatggta cgaacagtgcggcagagacctttcagaatatactgcaatgtaacctaagtgatatacgcggggtcaagaatatagcagac gatataataattcatgggaagacgagacaacagcatgacgaggcactggagaactgtttgaaacgattataccaactgaa cctaaaagcaagaccagaaaagtgcagctttctacagaaagaaatcaacttctatggcctgatcttcaatgcaaatggaa caagaccagacccaggaagaatcaatgacttagtcaaagttagtccacctaagaatgctggagaagtgcgcagctacttg ggtttaacgaacacttgccacgactatgtccctgactatgctgctattaccgcacctctaagagaacttaccagaaagaa cgttccatttatttggacaaacactcaccaaaaagcattcgaacaaatcaagaagaaactaacacaagccccaactatgg catactttgataccgagaaacgtagtctacttattgtcgatggatcaccaacgggactttgtgctattttaggtcaacgc gaaaagtctggcaactcatatcgcattatctcttacgccagcagagctctatctccagttgagagcaggtactcacagac agacatcgaaggactaagtcttgtctggggtatagaacattttcgattattcctattagggagtgagtttgatgtgtata ctgatcacaaagcgctggaatcaatctttaataatcctcgatcaaaaccaccagctcgaattgaaaggtggatgctgcgc ctacaaccctacaattttcatgttatttacaaaaagggaacagtaaatgaagacgactacttaagtcgccaccctgtaac tactccacgtacaacaatggaagagaaaatcgctgacaattatgtgaattacctcgtgaaccacattgtaccaaaatcaa tgacactccatgaaatcgaaacggcaactttgaacgatccccttttacaaaacgtcagagaatgtattcgatctggaaaa tgggacaaaacagacacacatctaactccataccgagtatgtgcagatgaactgtcaatagcgagtaatgtaattttaag gggcactcgaattgtcataccacaggcattacaagacaatgccaccaaactaggacatgttgggcaccaagggatagaga aaactaaagctttgttacgagagaaaatttgtaccccggaatggacagcaaagtcaaaaccatgattgaaaactgcattg cttgccaagcagttggaccagacaacccccccgagccaatgcgcatcacacccacatcaactggaccatggcaaagctta gcagttgatttttatggcccgatcccacacagtggacaatacttgttagtagttgtcgacacctattcaaagttcccaga agtagaaattgtaacttctacatcagctaaagcaattattccgaaactggatcgtatattcgcaacccatggcataccac agcagttgaaaacagacaatggacctccctttaatggagatgagtttatgagatacaccgacgccctgggaattaagtgg acgacaagcacacctttatggccacaaggtaatgggaatgctgagagtgttatgaaaccgataggaaaactgattaaaac atctactctcgagggtaagaactggagacaagaacttcagcgatttctgctaaattatcgttcaaccccacatgtcacca ccaagatccctccgtgtgaattgttatttaatcgaagggtccacggaacgttgcctgaactatcaacacagagggtaata aacaagaattcacaag |
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Protein
| Protein ID | aug_v2a.02357.t1 |
|---|---|
| Definition | - |
>aug_v2a.02357.t1 MPLFEPKADPTNTSARWTQWIERFDTYLVASNIKDTGRKRALLLYQAGPEVHEIFKTLPDTGDEKDYDAAVKALTTYFEP DKNKIYQTYTFRQAKQQDNETIDEFHTRLRRLAKHCNFPDVDFEIKMQIVCNGTSSRLRKKALKEPDYSLNDMLIDGRKS ETSNAQASGMEENFKELQVNQLEQKPATSSTCYNCGFAYPHSKPCPAANSTCNSCGIRGHFSRVCRKTKQRRFSKLNEST SDDRTSRHRQREPYKRQPRQTKDEDRARTIIKQSYTSTESSSDEDYAYVVAKKQNPKIKTSVRVNSVNVDFIVDTGATVD VIDSQTYYRLKSNVTLSRSTTRIFAYGSGKPLPLKGQFQALFESKTRYTVSQIYVVEGSAGNLLSAQTAQDLALIQLVNK VTEFNEPPPSPENGQTNATGTKLTRLSPAASPASLTVPKCSDLKIQQIIEQQHKTVFMGEDFRAELNGSKYFSKIDLKQA YHQLELAEESRFITTFSTHEGLFRYKRLNYGTNSAAETFQNILQCNLSDIRGVKNIADDIIIHGKTRQQHDEALENCLKR LYQLNLKARPEKCSFLQKEINFYGLIFNANGTRPDPGRINDLVKVSPPKNAGEVRSYLGLTNTCHDYVPDYAAITAPLRE LTRKNVPFIWTNTHQKAFEQIKKKLTQAPTMAYFDTEKRSLLIVDGSPTGLCAILGQREKSGNSYRIISYASRALSPVES RYSQTDIEGLSLVWGIEHFRLFLLGSEFDVYTDHKALESIFNNPRSKPPARIERWMLRLQPYNFHVIYKKGTVNEDDYLS RHPVTTPRTTMEEKIADNYVNYLVNHIVPKSMTLHEIETATLNDPLLQNVRECIRSGKWDKTDTHLTPYRVCADELSIAS NVILRGTRIVIPQALQDNATKLGHVGHQGIEKTKALLREKICTPEWTAKSKP* |
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