Gene
| Gene Model ID | aug_v2a.01300 |
|---|---|
| Locus | scaf508 : 760 ... 8585 : - |
| To GenomeBrowser | scaf508:760..8585 |
| Genes list of scaffold | scaf508 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable atp-dependent rna helicase partial | GO:0004386 GO:0097159 GO:1901363 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.01300.t1 | gi|390367138|ref|XP_792082.3| | PREDICTED: probable ATP-dependent RNA helicase DDX11 [Strongylocentrotus purpuratus] | 0.0 |
| aug_v2a.01300.t1 | gi|676441248|ref|XP_009049435.1| | hypothetical protein LOTGIDRAFT_112727 [Lottia gigantea] | 0.0 |
| aug_v2a.01300.t1 | gi|701345656|ref|XP_009982574.1| | PREDICTED: probable ATP-dependent RNA helicase DDX11, partial [Tauraco erythrolophus] | 0.0 |
| aug_v2a.01300.t1 | gi|705656493|ref|XP_010120476.1| | PREDICTED: probable ATP-dependent RNA helicase DDX11, partial [Chlamydotis macqueenii] | 0.0 |
| aug_v2a.01300.t1 | gi|701324856|ref|XP_010020852.1| | PREDICTED: probable ATP-dependent RNA helicase DDX11, partial [Nestor notabilis] | 0.0 |
Transcript
| Transcript ID | aug_v2a.01300.t1 |
|---|---|
| Definition | - |
>aug_v2a.01300.t1 cttatctgcttcttaaactgtttagggggtgagttcattttttacgtttgaaaaaattatggttagtttgttattgttgt tgtgttgttattgtcatggtgaaatagaacccttgatctcaatatgtatatggtcagcaataactataataattattgct gtaacttccagagaaggagatgctttcaaattccaaaatgctcttaacagctcctgctgaaaatggtgttctcactggcc taagggaacaaagggtaccaggtaaataacaaatgaaaatgattaaatattattagccttattcttctacctgtaacaaa tgccagttgccttaatggagtcttggtgcaagggaatagttacggacattcactctgtgctagattgaacctgtaataca agtagattgggtgggaaattgcaagaaagctaaaataaaattaacattacaaacccttgtacattattttaacatcaaat gaagcagacaacaattttttaaaaaacttaagtcacgacaacaatcaaaaaatcttatgctttacccaaaatattaccca acaagtacaatgatttttaataaacaagtacaatgattgtgagcaagaagaaagcactattcctctagcaataatgaaat tcaatcatttattttggtttcatcttcgcagcggaagtgaaattaaaaacaatcaatgacttcttgttttctgcaaaaat ggacaacgttaacctttttaaggtgagaatactttattattgacaaattagaatgtataaatatatagaaagttaggatt gtgtgctttctgttctctttcaaaatttcaggtcttaaatgggattcaaaccatgacctctgcgattctggtgcaatgct ctacaaattgagctttcaggccaactgtggtgcaggtcgattataagcctgtagatgatggatatggattgatatatatc gtgtaaatacatgaatatcatacattagaagtgcagattgaaatggtcctctcatgcatttctgctttttttttttctgg gaagggaggagtgggtgcttatttgaggctaggtacttattaacttttcctacctactgggtgggtgcttattcaaggta ggcacttatttgaggttgtacactttaaatgactgtgttaatgtggtaacccttttttgtcattcttttagataaaaaaa tactgcgagaagagcatgatttcgaagaaggtaaagctgtatgatggcaaatttattgtttaggaaatcaaattctttaa attgacaataatttaatctggactgatcttgtgccaaccctggcttgttcatcttatgtccaaaactgaaatgattattg ctttcatatgggttccttgatataaaaaaaattcctttctttctgtagcttaatggatttgtcgacaaataccagtctgg gcaggtagacacaggttagtgtgttagcagtgttctaccaataaagcaagacattaatgtcagagttggatgggcaggga ggtgctgacaaggttggagacagcctgacctattttttctggctatttaccacattttgtctggttctttaatacaataa ataactggcatccaccaaaccatagaaaaccagtccattcattgacatgtctgggtctctggaaagctgtcaaaaacctt gggagtatgtcatgtgtgagaacacgatgtgtcattaaccctgaaatgatgccgctgtgcatcttcatcttgaagtactt tgtttattcccagggcttaatgtggaacaggcataccacagtagcagctcaccactacaaatcattgagagctttttaga agcactaacaaatgctgacaaagatggaagggtggtagtaaatagacaaggtaaaatttcaacctttgcttgttgtgaaa cattcttgggataaaagtgaatatttggatcacatgcagtcaggtgcacatggcgaaattattctgataataataataat tgtttgtctcaaacataagagtaaagaagattagtttctgaagaaagtgtggtgctgcatcgagcgtttcgtttcgttcg tcagagcaaagggctaacactcgaaacgtcagcttttcaatctctgtacggtggtcaatttacattatcaactctgttga taaaccaaatttttgtgtctcaaacatagtttaccacaaatcatagaatgccaacacttacaatttgcaacaaataatat tacaatggatgttatatgggaaatattgaacattgaaaaaaattgtcaattgcaactacataatagtattgaaggaggca aataaaacatacagtcaaacctctactacattgccctctattaagcggtcatccccaataaaacagacagttgtcaaatt cccaaaaatcagtcccctcattaactgtaaaattgacctctagtagttggtcatctccatcaagcagacatggtcaccat tttagaattcccaactgactaattttattgcacttcacctcttttaagccaatagatattaatatcaatgtgatacatac tttgacacaacaatacatatttaacagtgtccagtttcttttgtcagctcatcaaagatatctagatatactggtacatg taaccagcatcagagtggttttgtttggatgaataaataatttttcccttcattttgaatggaaaaactgcatgttatta atctgacttacaacaaagataattaccttgcaaacaacattagaatttttagagggaacttccttgaacaagcaatttta catgatatttttctcatattttgagttactgttgttgttaagtgataaaatgtaaacatgctagttctgttttaaccata ctagatgctacattttggaaaaccacttctattaaagtggctgacctaattatttgaatccttgaattcttttagtgaag gacataattcactatgatattaaatatgctgtccttgaaaaagaaacagtctgtgctcttactcatctatcttcttaagc tgtcttttcgttttgattccacaggtcgactaagctgttccagtctcaaatttcttctgttgaatccagctgttcacttt accaacattgtgagagaagcaagggcagttgttgttgctggaggaacaatgcaacctgtgagtacaagattctgnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnntgctttaatttgacagacttcagtgacattggtaaaggctgttcaaatcct gctgtgacacaacttattcactattcaccttcttcacgctgaattgtggaattggacaactggttacattttgtctcctg gatttcttgacacgtttttgttgactagaataatagacctggtcagcaaactcaatgttgttcaaattcccaaaacaaat tcacattcctgaaacaaaacggtgtattccaagagggtttggattaggtacagcattgagttagccaatttggtctataa taattttgtttgatacttttgtaaagatttcccatgcacaagaatttttctcttacaaggcaaaagcaatttaatattgt gtcattattttttagatgtcagatttcaaagatcagttattcgcttgtgctgggcttcctaatgaaaatatagtagagtt ctcctgtggtatgtcattttcatctgttccttgacttatttttccggtgattgtactttgaagaatgctgaacgcaggga gcagagaccaacagcttcaatattcgtgtcaatgtatttatttattcacttctgtgtcaaaatttggagttccattcctt ttaagaattatctaggatgagatgtaattgtaataggttgaactcaacttcagcttcgagctttcagtttagtcttcgta cctgagcgaagacgaaggtgaagtcctaacactcgctgtgtaatcttcttaagatggaaattttaccctcatcaacccgt ttgttatcaaatattcttgtttcacttccccaccgaagcgacaccacagttttctaataaactgaaaaactgcattggtt tacttaaaatagagtcacgttctacgcgatttctgcaaaattgcattcatcattacattatacctttctaattgtttgct ctgtgtgcatacgttgcaggcttaccttgcaagtgggcgtcttaaagggcataatatttcctttgaatttcaggtcatgt tattccagcagagcatttattggcagtagcgctcgatagaggaccatcaggcaaagaacttgacttcacatatcaatccc gaggctccactgaattggtaaaaactaccgggagaaggaaagatacgtcgaaaaaaatgatctgattttacattcaagac atcttttggtgtcggatcagtttagtctcggtctttttgccatgatattgctgaatagcgtggccaacacaagtaaaact tttgccccacttcgtccgccattttgttctaaagcttaccggaagtgttgtgatcaatctgagctcctgtatatcatgtg attgaaaatatacatttgttaaattttaccctacgatatcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctgggggcggttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnggtttcctaattcgtgtaacaaaccctctggattcgtataattttgaaagaagc ttgtatttcttttttatttgctttctttaattttttatttgctttctttaacaccaaaacgaagggctaagtctcgaagc agcagatttaactcttgtcaacaaccctaataacaaattttagtggttccctatcccatcgacgcggcatcacagtttcc taacaaactaacctttcattctactgtaaactgcctaataaaaattgagcctcataatttgtatctctgcttttctttcc ctttgttttagaaagacgagttaggccgtctcctcgtcaacatttttgctgtagttactggcggagttgtctgctttttc tcctcgtatgactacgaggacaaagtttattcacactggcaaaaaacaggcattcttgaaaggatgaacgcgaggaaaaa ggtggggaataatgtcaacagttaaataatttatgcattattggttttagaggagagggccgaaagaaatttgagttgct gtctaagacgagcttttcagaccagagcagggaaaataagcgaaaaagatacttaaataaatcaataaatcaagaaaagc atgatcattgaatccgagaatcttcctgaagggtggtgaatgctatcactgcttcgccaatcgtgctccccgctaaaaat gcccccactagtattcctgctccccaggtggatcccggtaataacgggaagtgcagaaatcaaccatnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnaattcgaagaggcaaaatctcagtaaaaataaagtgttagagattctacttgacggagagggacaccttcgtctaa ggagttattacttttcttgggagcggcccctttttttttaccgtataacatattcatggttgaacgttttcgccaagata catcgtttccgaggtcacaattttgtgatttgttcgagagaggctgaagtgaacgccaaaatcaaattacagttgaatcg cgtgataggtctttaaatcattcattgcctgctgcggaaagtgtccattccctatcctgtgagtccattgggagtgacag agaaaaagataagaaggaaatacgcagtacatcttttgctgttcattaaacataaagggatatgcatttaagcgaaaaag cttgtcgttttcgagctttcattagggtctttgtgcaatcaattttaattcacacatttagtaacgttttttgcactttc attagcgcacaaaatatataatcaggagaaaagagtatctatcattgaatttcttccctatgtaagcatcttgtaagaag tttgcatgcatttttgtggcgtgatagcatttattcttcttgtagttgccctaagaagcaatctttttctcaactctccg agtggtggaccttgcttgatttagataatcgaatatctaaaactaggccgaatttgtccctgtgtataatatatcacaaa cccacggcttgctcacgttctggccttgtggctcagtcggtggagcagcggtgatctgatctgaaggtcgtaggttcaaa cctcaccctagtcagatactttcgctgtccttgtgtggacccaattccaatactagggttgatccctgatggaataattg ggtatgaaaaacttaagcctgcgggcaagctctctcgtgcggtgtgggtggccacccacaccgcacgagagagcttgctc gcaggctagaaaaacttcacagtagtgttaggccctcactcggaactttgaattattactgtcaacatgctactgaagga caacagcttaagattatttagaatctcaatgtattgcgctaatgaatttacaaaaagcgttattgaatgtgtgaatttga atcttgattgcacaaagaccctaaggcaagttggaaaacgctaatgaacctgtacaaacatattcacgattgtcaatttc tgtactaaattcgttaatgaacgttctatttatcattttcttcagaattctgcggacaacaacccatctccaaatggtgc agttttgttctgcgtggtcggaggcaaaatgagtgagggtattaacttttcagatgaccttggaag |
|
Protein
| Protein ID | aug_v2a.01300.t1 |
|---|---|
| Definition | - |
>aug_v2a.01300.t1 MSDFKDQLFACAGLPNENIVEFSCGHVIPAEHLLAVALDRGPSGKELDFTYQSRGSTELKDELGRLLVNIFAVVTGGVVC FFSSYDYEDKVYSHWQKTGILERMNARKKNSADNNPSPNGAVLFCVVGGKMSEGINFSDDLG |
|