Gene
| Gene Model ID | aug_v2a.01135 |
|---|---|
| Locus | scaf451 : 5147 ... 13675 : - |
| To GenomeBrowser | scaf451:5147..13675 |
| Genes list of scaffold | scaf451 |
Manual annotation
| Study field | Immunity |
|---|---|
| Gene name | Adi-MyD-88 partial |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| myeloid differentiation primary response protein 88 | GO:0002218 GO:0002237 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.01135.t1 | gi|156405972|ref|XP_001641005.1| | predicted protein [Nematostella vectensis] | 4.0e-27 |
| aug_v2a.01135.t1 | gi|659667801|ref|NP_001281130.1| | myeloid differentiation primary response 88 [Cynoglossus semilaevis] | 7.0e-23 |
| aug_v2a.01135.t1 | gi|255733218|gb|ACU31062.1| | myeloid differentiation factor 88 [Cynoglossus semilaevis] | 7.0e-23 |
| aug_v2a.01135.t1 | gi|37362395|gb|AAQ91324.1| | MyD88 adaptor [Danio rerio] | 9.0e-23 |
| aug_v2a.01135.t1 | gi|560894460|ref|XP_006173723.1| | PREDICTED: myeloid differentiation primary response protein MyD88 [Camelus ferus] | 2.0e-22 |
Transcript
| Transcript ID | aug_v2a.01135.t1 |
|---|---|
| Definition | - |
>aug_v2a.01135.t1 gagattactaacccatattgaaagcattaagattacagaggtgatttcacatttagagaaaatggggagacaggatgcag cagaggatcttcatcaatttgaaggcaagttttctttcttagtttatcttactgtggaaatgcctctgcttgaggcacta ttacgaagaccacaataactttatttgtccttgacttttctgtgttttcctctttgggttaaaaatcttctccctgtctt ctacatcacggcaagtgtagacttaatgttaatgaaaaaattttttgtgggattacctgcatgatgtttttgtttttctt ttagagttaactcattctcctggtgaattggaagaacacaggagaagaattggtttgtattctgaagtcatgatttttaa actacattttgatcttggagtttttggtgtactttagttgcttttaaataataattatttgtatctcaaatcccaattgc atgaagtcacccaaaacagccattaggaaaagtgggatgtttttctgttagtttgccattgaattaaccctttgtgcacc ttcatgtttgagtggcactcattgggattacatagttgtgggtgtgaaaaagaagaacagcagcaatatctctatctagg ggcaccattgggctaaaaaatatgaattcatgaccctactttttccctcctccatctctcaggttaactttgaaagattg caaaaaaatgatacacagcaaacactgcaagattttcatcgcaaaagtggtgttcagtcttttgtaacatttattgttgc ccatgaaactgggttatccagacacttttttttcaatactttattaaaatagtaaatttatttatactaacaaagatgaa ggaagacaaggaaaaaaatcttttactcgaaggattggaaaataaataattattacagtacagtatatggnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnncaggccggtgaattatcatggggggggggtgtatcagtgagtacaccatggttgg tttttcatgacccctaaacttgaaacacaattttcttccaaaatggaacaaaagtctcattatcatcaccattgacaact tcagctctcaacaacaaaagtcctttgttggacgtaggccttcttacaacattgctgtgtgtgccattgctgttgcactt ggggtgtctaaaagtgtaaccagaaatgaaatgtacccattgaggatagcgtaacaccttttggcaaaactaataagcta tgtaccagtcattagattaatggacaggcatactgaagacagtgaaaatgttgagtcaaatgaaaatcgtgtgtcaggtc aaagtgatgaaactgttcaaaattatactacacaaactccattcgaaatatatgagaaaacacaaagtagaatcctggtt actgtgctacgaacttcgtgtgtttaaatataatttcagttatactggcaggccgcttcagggccctggtataatggcta ttatgagtcatatgaaagttgaaggaatcttcagaaattcttatacattttgtttacagtacaaaataatatggatattt atctgatgatactttaatatagaagtcttcaatgacaaaagttataggtacacctacataattttttgtagttcccctcc cttgatccttacctaaaatttgctgaccctgcccctatctgcactagttccccctccccactctatgatgatattattat tgactggtcccttaagaataataataataagtaatagtaattggaccgaatggagtacaattcagggagtaatcaggtga gtaatttcgatttgaaattacaagcatgattactccctgaattgtacgacacaaagtccaattactaataattattaatg gtaactataacaaaatttgagaagaatatggcagtggtataaactatttgacaggttgatatatattcaacttctgagct agatgctgaaaaagaaaccattcaagtgcaactagtgcgagcttgatgacgcgtactgtccaattattactcaggcatga cacgtacaactgtccaattacaagcgcatgacgtgtgcaactgtacaattacggctcaaatcagggctgctgatgaccaa tcagattcaagaattttgatatagttatgacaataattattatttttcaagaattttgtccataaccttattagtggcct ggatccttcatcttgattcctaccagtctggttccagttgttcaaaggatggacagagccagtgggtaaatactactaaa acccattgggctgtccaacagttaaggctgttctcccttgtaacaactggggcctggataatagaagtttcagctatggt aatattattatcaaactgcattttttgcagttcatttcgtggctcgagttgaagtgcaaagaataaactgaaattacaga caaagaaaataagattagaaagaatgatgtttatgatatctcttggaaatagaccaaggccaggcctttagttcattcaa aggccaggcttagttgcctggcctctgaatgaaagtgaggctgaggttgatcttgttttgataaaaacctgtctgcattt ttcttcttaatgatattgtcctcatgtcaattagtagtacggtttctgaggttttttattttttcatttatctcttgtct gtgttcacaggtgacactgaagacaggccgacaagtgagtataaattttatttcagaggtcatcttgataatgtagttaa tttactgagttataattatatcccttgacattagtaaaaagcaaagtaaatagaattcattgttaatattaaaataggga aatgtcatattaaggtgcatttttttggaagaatctaaaaaatgatttgccatcccttgttataataatattatttttga ttcttcaacaccccaacaaaatgggttctcaaaaaaggattatttgtctggacaacacatgctcaattaatcaaaaccgc tgacctaaaaatatgcctcctaaactaataaagcattaaagaccatcgtatcattggctattcatttttgggtagnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtggtaaagcttagaacactatgaactgtggatgaaa tcattgaacttaagttacatgagatgttgatgaagatactgatgatgagaaagtatgttgctttgttttcttcctagcac acaaaagatacgatgcctttgtttgtttcgctgcacaagacaaacagttcttgaaaaagctggtcacaacaatggaagca caaccctataatctacgtctttgctacacagagcgtgacttcctgggaggtggttgctaccttgaaaatgctgctcttgt tattgaacagatgtgcaaaaaatttgttgttcttctgtccaagaactatgatggtagtgacggagctgtttatgagtcac agattgcaattaccctagaaccaggtaagtaagaattctctattcttgtgctttgtctgatcaaatacatttagttcaaa ttactctgaacattttatatgtggtcccatacacacccttgtgtaagtggcacctttttggtcacatttagggtctaaaa ttggcgtgtaaaattggggttgctacaaggctgtctccattggggattaattaatgcatggtttgggattgtaagtctat ccctttggcagttcttttaagcaactgaattttgctttactcaagaaactgcattccagctaatgttgatatggaatctc cagtcctctgcaaagttacgtacttgcaatgttgtcttcagctggcaaatatagcagagatctttccaccatgtaagcaa ataatattgcgagagaactcacatatcatcgtatcactgacattgacttttttagctaaaagggcaaattttgttcttgg aattatcaagcccctccttctgtgatatgtttctctccaatcaatggcttccataggtcttgataaacatggtattttgg cacagctgagatgaaaagacaatttttcatgatggcattacagtgtttactcagaccaggccctcaggctttctgtcaat gtcttcaaatgattgcttggtcactaactgctattgctccttggcttggataggaaatctttgaattgtattttatttga tgatggaatctaaattttctctaacttagttttcaagatgtaacaaaaggtcatcccaagttttaataaattattattac tcagtaccatcttgtttgcccaggctgagcaaattgatgggtgaaatttcttcttctctacattgttgggtgaatgctag gttacctcctgggctgaaattgcagaggggaggggctgtttcagggctcgagactaagacttttgagcttgctagcccag tggctagtgacaggtttgatccactagccaagacaaatttttcactagccagatgcagacatttgttacagtaaagtgaa caaagattctctcggacttgtgaacccaaattcttagttcttttattttcatcctgtcaatcagtgataatgctgcggag aaacaacaccattaataataatgcgcatgagtgcttctaccaagttttgactgatggtcacacatgatcctgttgagaca tgaattgcctctctcacagcaggaaatttggacggggattaaaaggcaaatttcaatgaccagcagaaaattgaggaaac gttcccgctctagtctccttagagggagactattctgactattcccgcacctgaaaagtacaaagttttcacacccttga ttctcacagaaccaccttcaaaacttcagaaataatttgttgcaccttaactcccttaattccatatgttgcaaacatag gcattgttgttataattattattatataggggtcactcgacatcgaaaaccaaaattttcgcttttgtgagaagttcgca cagaactttgcaactagccgctgaaaaacattccttgctttcaaaatgccgattcacaatttctcgtgaacacaatgatt cattccacttaactttatttccaagttgcaaacataggcaccaataccaattattgtgatgttaatggaaagcaatcaag acccataagtcctttgtcttgcaggagcacaacaacagcgcattatcccaattcttttggaagacgagtaccgcaaaacc attccaaagccaatggctcatcttacctatcttgattatcctcgatggcaagagaacattcccaaattctgggagaaatt agcagtttccctgggatggaaccagagtcagacgtcatgtagaacaggtgaatagtcatgaggtcaggccaaacccatag ctttgtttactgttgttgcttgcaatgaaggagcctaattcctggcctattggtggtcaacagaaacttatagtatttgc ttagtaatgtattgtactatttcttttatggactgtctttatccaatctatggagcatgctttcctgttaagattatcac tgtcaaagaaaattcagaagccaaaacttggtttacctcagggctccaaaactcctgtcacaagaagtattctctctata aacaatattgtaataatcctacatcagctaacaaaggtgtaaatataccaaattccataacaaatacaactatttaatca aactatgtagaaaaaaagtactaccatgataaattgtctcctatatgttcatcactaaaacaaaccaggtgcccaattaa atctggtatttcttctaaacattctagctatgggcctactgccatgaaggacaacagaggtagcactattaacaaccctc aattaattgctaatacgtttaatgaattctttactaacattggtccttcttttgctattaaaactccccactccactgtt gactacaaatcatatttgagtggttcttttagtgacagtttcttttcctcacctactacccctgatgatattatcaatat agtgtcctctctgaagagtagcaacagtgagggagtggacggtgttaatgttaatgtgattaaagcatctattgatctct ttgcatctcccctctctcaaatgtgcaatatttccttctcaactggcattgcgcctgataagcttagaatcagtaaagta attcccatgttcaaaaatgaagatagcactaactttactaattgtaggcttatctcaatctgtaccttgcttctctaaaa tccttgagcgtgctatgcaccgtcatctaatggacatggactgtctcactaaacatagcataatcaataatcatcagtat agatttagaaagaaacattccacttttagggcaatactgctggaacttactaataaaatatttgatttatttgagaagaa aaaaaattcacaattggcatattcattgatctaaagaaggcatttgataccgttaatcactccatcctcttagataaatt aaacttctgtggtattcaaggcacatcttttaactggatgcatagctatctcctctcttgctctcaatatgttcacattg tttcttggaaatctccgctgcttccaattaaatgtggtggtcctcagggttctgtattagggccacttttgtttcttata tacattaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgtggctacctggcttaaagctaacatgaggcgaagcggaat gggctattgatccgtggcccttgagggcgaagggtccaattattttagtatcacccaactagtcggacagaaggaagcaa taataaattcagccaaaaaaatatatttatttgggaataaaacgaaataaataggtttacaaaaccggcgaacttcgcta ctcgatgactattactagtagacctatagtagtgtagccaatcaaaatgcaggatttgcattagttcaggttacctcttg tgaactatcgactgacaacattaaggttagcctttgtgtttggttagttcttcggttaggattaggcttactgtttgttt gtttgtctcctggtctgattttccttcagtgctcccatcatcaaatttgtgcatcagatgtactccatcaagacggccat caaagttcatctttggagttcgcttcagatttggcaagaaaaagaagaaggaaatcatgttgaagcgtacatgaagggtg aagtcgagttaactgtgtttgtttgttgtattgaaaggcaaaagaggttgtcaagttacatttgtaaagcattgctaagg tgtctgagaatgtgaccataaaggaaggaaggggtctgttggcagtagcgataaagaaactagctgtttgaagtaaaagg atgagctgaagattgtcctttttttctgtatttttatttacacagaagcgagacttaagtaacttttaagcttgaccctt tgtgaaagaagaataagcaataagtttccccctgtttgttttatttttgtagatacagtgtgtgaaacgtttttattata gtgcttgtagtcgtagggattttgttgtctatagttgtataaaggatttggaaatttaggacaattttgaaatatcgcga gtgttatttatgccaaatatcacttacaaatcatgtcattatttgttcatactacaacctgagaaattcacccatgtaac accatatgtttggcgagcaaattggtttcagagttcttgttttcgtcccagctggtccagccattgatccaggtcgatgt agttttcttagcattttggatagtagcattttcataactttcttttagttcctgattctccagaattttaaaatctggaa atctttcagcaattatttcgtgatttggttaccatagtaacnnnnnnnn |
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Protein
| Protein ID | aug_v2a.01135.t1 |
|---|---|
| Definition | - |
>aug_v2a.01135.t1 MGRQDAAEDLHQFEELTHSPGELEEHRRRIGDTEDRPTTHKRYDAFVCFAAQDKQFLKKLVTTMEAQPYNLRLCYTERDF LGGGCYLENAALVIEQMCKKFVVLLSKNYDGSDGAVYESQIAITLEPGAQQQRIIPILLEDEYRKTIPKPMAHLTYLDYP RWQENIPKFWEKLAVSLGWNQSQTSCRTVLPSSNLCIRCTPSRRPSKFIFGVRFRFGKKKKKEIMLKRT* |
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