Gene
| Gene Model ID | aug_v2a.01085 |
|---|---|
| Locus | scaf433 : 86 ... 3747 : + |
| To GenomeBrowser | scaf433:86..3747 |
| Genes list of scaffold | scaf433 |
Manual annotation
| Study field | Photoreceptors / Circadian |
|---|---|
| Gene name | Adi-opsin-4 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 15-hydroxyprostaglandin dehydrogenase | GO:0044763 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.01085.t1 | gi|585645901|ref|XP_006882278.1| | PREDICTED: 15-hydroxyprostaglandin dehydrogenase [NAD(+)]-like isoform X1 [Elephantulus edwardii] | 4.0e-27 |
| aug_v2a.01085.t1 | gi|466052880|ref|XP_004278733.1| | PREDICTED: 15-hydroxyprostaglandin dehydrogenase [NAD(+)] isoform X1 [Orcinus orca] | 2.0e-26 |
| aug_v2a.01085.t1 | gi|126331323|ref|XP_001371788.1| | PREDICTED: 15-hydroxyprostaglandin dehydrogenase [NAD(+)] [Monodelphis domestica] | 3.0e-26 |
| aug_v2a.01085.t1 | gi|470610754|ref|XP_004315358.1| | PREDICTED: 15-hydroxyprostaglandin dehydrogenase [NAD(+)] isoform 1 [Tursiops truncatus] | 3.0e-26 |
| aug_v2a.01085.t1 | gi|704240915|ref|XP_010144780.1| | PREDICTED: 15-hydroxyprostaglandin dehydrogenase [NAD(+)], partial [Eurypyga helias] | 3.0e-26 |
Transcript
| Transcript ID | aug_v2a.01085.t1 |
|---|---|
| Definition | - |
>aug_v2a.01085.t1 aacgctgtcatccgaggtacctttcttggaattgagctcatgaagaacggagtaattattaatgtgtcttcaactggggg taagagaaatacataaatcatacagattccgcatgctggcatcataacaagtgagcttttctcgtggtacgctctttcct atcaaactgccggtcacacgtgtgacgtacataagttctattagtataaatttactcgtagtctatcgtgaatccgtgaa tctgattggctatcttactcgtagactatctgctgatagtctacagttgtgaatagccaatgaaaatccgctattttgaa cacgtgaagcttgtttcacacctcagtgcacatcacgcgcagtgtttgaaacctttgaattgccgatgtaaacacaataa aacattttttcctaaacattactttacatttttatgcaatgagactaagagtaaatttatactaaaacaattagaccact cgccctcgttttctacgagcgatagtcaactcggctgcgcctcgttgactatctgctcttagaaaactcgtgctcgtagt ctaattgttaaatagactgatattgttcctgcaaacttgaaggcttaattctatcttaatttataatgatagatagctag ggagcgggcttgccgcagtgataagggcaaccgctttcccgcttcaatcttgtttgttggttctgtgcgccgaaaagttt ttcccggctgctctggttttcctccctccgcaactaaaaatttgatttgagcttttgtgattctgtttgattagtagtct cctcaattagaatagaaactgtacccggctaaatccactacggcataaataaagtgatgattgttgttattacaagtcag cttgaaacaaagactcgccctttaatatcaggcaacgtgagtcctatctcgacagtctcgggacactcgaatttcaatcc gagtgcacctaacgaaagtcggccttaccttaaattttattcacatgctttttcatttactaaactcatgactattacat tttcacttccataggaattcacccgatttcagcttgccccgtttactgtgcctcaaagtttggtgtggtgggattcacaa gaagtgttgctccagtaagtagcattggaaactgaagttgctctcctgcgaatgcgacaaaaagcgctaaattaaggctt aacgcggtgatacttgatcctcgttccaagggcttataaaattctctgttggttttacactcttaagtagtggcatagca tgacgtagcttggtttctgtgttctcgtactcttttctctctgcagccagcttttaacaagaaagggattcgagtgaatt gtgtttgcccagggaacaccgacacaaacatatccaaggccgttgagaatttgaaacttactaaaaaacaagaagaactc gtatctaacgctcctaagcagaggttagtatctctgggaattgaggaatgacccctttcccagaagaattataccaaggg agaccgagagccagggaaatcgtatgatgagtggcaaaccgtagcccatgcgtgaaatgcaaaaaagaatctttagtttg cattataagtctaaataaacagtagcgatgactttacgacagaacgtgttcttttaattaggttgaaggccacatcaagt caaagtgtggcacgtcgtgacgcttatatgcacattggtttttagctcgtggagagccatcgggatggttggggaatcag gatgccaggtgtaaacagtggaaatttttaaaatcgatttctaatcgtctcaagttcggcagacacttttacgaattcat aaaatggttgttatgtattactctccatttgcaaccactctataggcttgataattcactgtatcacccagctccctgac acagtgtcgtacttactccacgagcttaccacagaatacctttgattggacaaagcttgactcttttgagcacatttatg ctattggtccagtggccagagggtgcgctaacctgatttctgtcatcttcggagacccagggacaattagtcgggacggg aagaagaaatcacgcgcaaaatcgggaccagtgagactttacaagtagtctcggacaccttatgaactgccgctgtttcc gattttgcccgtgatttcttcatcctgccccgacgaactgcccctgggtctccgaggatggacttgaaagcttttacttt ttcataagcatcgcttctttagacttcagtagatttgtcgggcaattaaactcgttaatttgtcctttcagaccagaagt tgttgctcaatgcatagtggatttaattgaggatgaaagcgaaaaaggggctgtagtaaaagtgacgcaggaagatggtg tggaatatttgaactacaatgatgtaagtatatgtacaattgcaaatagtttgaacagattcaggaggaccattctctgg ctgcgctaagtcccatgatcactagaatagcctgcatgcagttaagaaataattttagtgtacggactttcatgatcagc acttactgttttcatgagacgaaagagatgagtgtagagggagacaggaatttcttttctctctccccctaatctctttc tcctgatgacaacaacgccttcgtcaaagcatcgaaagtcggtaggctaaaatacgcctgcagtgggggctccgtgtgga aggagagcaatgtgaacgtttgatcaaatcagttcccaaaacttgaatcagtcctagtactagaataaggctcggctgtg gaaagctgtcgcctagagcgtttttagcctttcgctgcatcaatctgatccgtcattaaacgcagtcattatcttgtcaa tctctatcaacaaaactatccttgactctaattcatgactcttctttgctataaacgaaaatttgatatcaaacaaagtg ataagggtgaaattaccattgtgaagaaacttacgaatctgacgttattcgccctcatatcataaaggactaacgctcga aacgccagctttgaaatcgttttacgttggtagcggttatcaacttgtttggtaaccagttttactttccgactgacaca gcatcaagctatttaaggtttcagtaactaaactagtcctctgttataaaactgaatattcacattaatttttcaaaacg ttttctttcagattgttatatgagttgcgatctcttccagctgataaggccatggtatctagggaaaattagcgcattgt tgatgacatctatttgcatgaaaaccaagagagagtgtattgcagtaagacattcatgaaacactacccttccgtaacag tatcttgttaattgtccgctgtaatgctgtaatgctgtaacgcattttgtatttggactagcttaacgtttggtctgcta cgcaaccgaaggttacttttgaaaatcttgaatgttgcgtggcatacgaagggttaagttagtccaattttaaaatgcgt ttatcaacaatgtatattatcgctatttgtattctatttctggtaatataacgatggcacaagaaaacaattatatgtac atgtgcaaattttgctttgaaatacaatatacagcatttcgaaataattactgttggagtcg |
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Protein
| Protein ID | aug_v2a.01085.t1 |
|---|---|
| Definition | - |
>aug_v2a.01085.t1 NAVIRGTFLGIELMKNGVIINVSSTGGIHPISACPVYCASKFGVVGFTRSVAPPAFNKKGIRVNCVCPGNTDTNISKAVE NLKLTKKQEELVSNAPKQRPEVVAQCIVDLIEDESEKGAVVKVTQEDGVEYLNYNDIVI* |
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